CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cob_04781
(
Colletotrichum orbiculare
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
Cob_04781
T364418_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ANIA_00928
M01343_2.00
Aspergillus nidulans
NNHYCGKRWH
DWYMCGRDNN
PBM
Lambert et al.(2019)
pEX0387
0.538
0.553
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENH86728
Zinc cluster
130
167
FGCKECKQRHVKCDETRPSCINCSTALRRCSYLDTETT
Links
Other
Zinc cluster
family TFs
Other
Colletotrichum orbiculare
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ANIA_00928
Aspergillus nidulans
CADANIAG00001727
D
0.538
CADAFLAG00001126
Aspergillus flavus
CADAFLAG00001126
I
0.538
CADANGAG00001424
Aspergillus niger
CADANGAG00001424
I
0.538
CH063_12421
Colletotrichum higginsianum
CH063_12421
N
0.547
fgenesh1_pm.00042_#_359
Aspergillus carbonarius
fgenesh1_pm.00042_#_359
I
0.538