CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HCBG_05620
(
Histoplasma capsulatum
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
HCBG_05620
T370559_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HCBG_05620
M02579_2.00
Histoplasma capsulatum
NNNCGGNHNN
NNDNCCGNNN
PBM
Weirauch et al.(2014)
pTH8594
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.537
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M02579_2.00
Zinc cluster
51
94
IACRYCRRRKIRCSGFESSQDGRCSNCVRFNQECMFTPVSSQAQ
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EEH06304
Zinc cluster
54
97
IACRYCRRRKIRCSGFESSQDGRCSNCVRFNQECMFTPVSSQAQ
Links
Other
Zinc cluster
family TFs
Other
Histoplasma capsulatum
TFs
122 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMXG00000006596
Astyanax mexicanus
ENSAMXG00000006596
N
ENSAMXG00000010401
Astyanax mexicanus
ENSAMXG00000010401
N
ENSGMOG00000008935
Gadus morhua
ENSGMOG00000008935
N
ENSGMOG00000018159
Gadus morhua
ENSGMOG00000018159
N
ENSLOCG00000004823
Lepisosteus oculatus
ENSLOCG00000004823
N
ENSONIG00000001964
Oreochromis niloticus
ENSONIG00000001964
N
ENSONIG00000006414
Oreochromis niloticus
ENSONIG00000006414
N
ENSPFOG00000019322
Poecilia formosa
ENSPFOG00000019322
N
ENSXMAG00000000596
Xiphophorus maculatus
ENSXMAG00000000596
N
vezf1a
Danio rerio
ENSDARG00000008247
N
vezf1a
Gasterosteus aculeatus
ENSGACG00000020304
N
vezf1a
Oryzias latipes
ENSORLG00000009698
N
vezf1a
Takifugu rubripes
ENSTRUG00000011480
N
vezf1b
Danio rerio
ENSDARG00000061030
N
vezf1b
Gasterosteus aculeatus
ENSGACG00000000419
N