CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PCH_Pc12g08840
(
Penicillium rubens
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
PCH_Pc12g08840
T377049_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ANIA_01729
M01398_2.00
Aspergillus nidulans
NVCCGGNWN
NWNCCGGBN
PBM
Lambert et al.(2019)
pEX0275
0.569
0.718
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CAP80511
Zinc cluster
26
64
RACDGCRRVKEKCEGGVPCRRCLRYRRQCNFTHIDPNEK
Links
Other
Zinc cluster
family TFs
Other
Penicillium rubens
TFs
22 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACLA_083620
Aspergillus clavatus
CADACLAG00007771
I
0.593
AFUA_6G08790
Aspergillus fumigatus
CADAFUAG00001570
I
0.593
ANIA_01729
Aspergillus nidulans
CADANIAG00008374
D
0.569
ATEG_06629
Aspergillus terreus
CADATEAG00009107
I
0.593
CADAFLAG00009914
Aspergillus flavus
CADAFLAG00009914
I
0.593
CADANGAG00008951
Aspergillus niger
CADANGAG00008951
I
0.593
EURHEDRAFT_377589
Aspergillus ruber
EURHEDRAFT_377589
I
0.569
fgenesh1_pm.00118_#_285
Aspergillus carbonarius
fgenesh1_pm.00118_#_285
I
0.593
NFIA_054440
Neosartorya fischeri
CADNFIAG00005184
I
0.593
OIDMADRAFT_106725
Oidiodendron maius
OIDMADRAFT_106725
I
0.552
Pc12g08840
Penicillium chrysogenum
Pc12g08840
I
0.683
PDE_08811
Penicillium oxalicum
PDE_08811
I
0.669
PDIP_36160
Penicillium digitatum
PDIP_36160
I
0.683
PEX1_074170
Penicillium expansum
PEX1_074170
I
0.683
PITC_096370
Penicillium italicum
PITC_096370
I
0.683
PMAA_073600
Talaromyces marneffei
PMAA_073600
I
0.569
PMAA_073600
Penicillium marneffei
PMAA_073600
I
0.569
S40285_06305
Stachybotrys chlorohalonata
S40285_06305
I
0.544
S40288_04276
Stachybotrys chartarum
S40288_04276
I
0.544
TRIVIDRAFT_55393
Trichoderma virens
TRIVIDRAFT_55393
N
0.549
TSTA_094060
Talaromyces stipitatus
TSTA_094060
I
0.568
U727_0043150051
Penicillium solitum
U727_0043150051
I
0.683