PTRG_09915 (Pyrenophora triticirepentis)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 PTRG_09915 T379575_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NCU01243
M02588_2.00 		Neurospora crassa
NNNSCGN
NCGSNNN		 PBM
Weirauch et al.(2014)
pTH8917 		0.589 0.889
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EDU42966 Zinc cluster 577 615

Links

Other Zinc cluster family TFs
Other Pyrenophora triticirepentis TFs

147 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30024.m001746 Ricinus communis 30024.m001746 N
30131.m007244 Ricinus communis 30131.m007244 N
Aquca_014_00674 Aquilegia coerulea Aquca_014_00674 N
Bostr.26675s0133 Boechera stricta Bostr.26675s0133 N
Cagra.0860s0005 Capsella grandiflora Cagra.0860s0005 N
Carubv10008999m.g Capsella rubella Carubv10008999m.g N
cassava1375.valid.m1 Manihot esculenta cassava1375.valid.m1 N
cassava1376.valid.m1 Manihot esculenta cassava1376.valid.m1 N
cassava13860.valid.m1 Manihot esculenta cassava13860.valid.m1 N
cassava20989.m1 Manihot esculenta cassava20989.m1 N
cassava31043.valid.m1 Manihot esculenta cassava31043.valid.m1 N
Ca_11133 Cicer arietinum Ca_11133 N
Ca_27441 Cicer arietinum Ca_27441 N
chr2.CM0018.90.nc Lotus japonicus chr2.CM0018.90.nc N
chr3.CM0460.90.nd Lotus japonicus chr3.CM0460.90.nd N
Ciclev10015219m.g Citrus clementina Ciclev10015219m.g N
Ciclev10031389m.g Citrus clementina Ciclev10031389m.g N
Cla006433 Citrullus lanatus Cla006433 N
Cucsa.055340 Cucumis sativus Cucsa.055340 N
Eucgr.B03716 Eucalyptus grandis Eucgr.B03716 N
evm.TU.supercontig_197.7 Carica papaya evm.TU.supercontig_197.7 N
evm.TU.supercontig_84.12 Carica papaya evm.TU.supercontig_84.12 N
GLYMA11G10170 Glycine max GLYMA11G10170 N
GLYMA12G02490 Glycine max GLYMA12G02490 N
Gorai.006G125700 Gossypium raimondii Gorai.006G125700 N
mgf008315m Mimulus guttatus mgf008315m N
mgf022906m Mimulus guttatus mgf022906m N
MTR_4g076140 Medicago truncatula MTR_4g076140 N
MTR_5g009080 Medicago truncatula MTR_5g009080 N
orange1.1g011736m.g Citrus sinensis orange1.1g011736m.g N
orange1.1g014413m.g Citrus sinensis orange1.1g014413m.g N
PGSC0003DMG400004649 Solanum tuberosum PGSC0003DMG400004649 N
PGSC0003DMG400022709 Solanum tuberosum PGSC0003DMG400022709 N
PK02707.1 Cannabis sativa PK02707.1 N
Pm012190 Prunus mume Pm012190 N
POPTR_0001s06090 Populus trichocarpa POPTR_0001s06090 N
PRUPE_ppa005243mg Prunus persica PRUPE_ppa005243mg N
SapurV1A.0009s0760 Salix purpurea SapurV1A.0009s0760 N
SapurV1A.0415s0050 Salix purpurea SapurV1A.0415s0050 N
SapurV1A.0504s0280 Salix purpurea SapurV1A.0504s0280 N
SCL3 Arabidopsis lyrata fgenesh2_kg.1__4122__AT1G50420.1 N
SCL3 Arabidopsis thaliana AT1G50420 N
SCL3 Populus trichocarpa POPTR_0009s05330 N
SCL3 Vitis vinifera VIT_06s0009g02390 N
Solyc12g099900.1 Solanum lycopersicum Solyc12g099900.1 N
TCM_040833 Theobroma cacao TCM_040833 N
TCM_042392 Theobroma cacao TCM_042392 N
Thhalv10011447m.g Eutrema salsugineum Thhalv10011447m.g N
VIT_13s0019g01220 Vitis vinifera VIT_13s0019g01220 N