PV09_05237 (Verruconis gallopava)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 PV09_05237 T381706_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NCU01243
M02588_2.00 		Neurospora crassa
NNNSCGN
NCGSNNN		 PBM
Weirauch et al.(2014)
pTH8917 		0.544 0.939
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
KIW03468 Zinc cluster 555 590
KIW03469 Zinc cluster 555 590

Links

Other Zinc cluster family TFs
Other Verruconis gallopava TFs

141 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo2g121020 Brassica oleracea Bo2g121020 N
Bo5g065610 Brassica oleracea Bo5g065610 N
Bostr.15697s0404 Boechera stricta Bostr.15697s0404 N
Bra023153 Brassica rapa Bra023153 N
Bra039880 Brassica rapa Bra039880 N
Cagra.1508s0093 Capsella grandiflora Cagra.1508s0093 N
GRMZM2G081812 Zea mays GRMZM2G081812 N
Pavir.Ba01662 Panicum virgatum Pavir.Ba01662 N
Pavir.J03264 Panicum virgatum Pavir.J03264 N
PK05604.1 Cannabis sativa PK05604.1 N
Sb02g032810 Sorghum bicolor Sb02g032810 N
Si030356m.g Setaria italica Si030356m.g N
Solyc02g032120.2 Solanum lycopersicum Solyc02g032120.2 N
SUF4 Arabidopsis thaliana AT1G30970 N
SUF4 Arabidopsis lyrata fgenesh2_kg.1__3297__AT1G30970.1 N
Thhalv10008022m.g Eutrema salsugineum Thhalv10008022m.g N