YPR196W (Saccharomyces cerevisiae)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 YPR196W T388382_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
YPR196W
M00110_2.00		 Saccharomyces cerevisiae
NCGGDNWWWH
DWWWNHCCGN		 PBM
Badis et al.(2008)
YPR196W_2047		 (Direct) (Direct)
YPR196W
M01601_2.00		 Saccharomyces cerevisiae
CGGARAAA
TTTYTCCG		 PBM
Zhu et al.(2009)
Ypr196w		 (Direct) (Direct)
YPR196W
M07537_2.00		 Saccharomyces cerevisiae
CGGRDWAWY
RWTWHYCCG		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0437.1		 (Direct) (Direct)
YPR196W
M08700_2.00		 Saccharomyces cerevisiae
NNWNNBCGGRDAAWTHNNNND
HNNNNDAWTTHYCCGVNNWNN		 Misc
DeBoer et al.(2011)
YPR196W_861		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MAL63_YEASX
M11473_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$MAL63_Q5 		0.597 0.868
ANIA_07343
M01326_2.00 		Aspergillus nidulans
NNNCGGNNNN
NNNNCCGNNN		 PBM
Lambert et al.(2019)
pEX0187 		0.554 0.605
For this family, TFs with SR scores > 0.537 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M00110_2.00 Zinc cluster 5 42
M01601_2.00 Zinc cluster 6 43

DNA Binding Domains

Protein ID Domain From To Sequence
YPR196W Zinc cluster 6 43

Links

Other Zinc cluster family TFs
Other Saccharomyces cerevisiae TFs

9 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
22689_YPR196W Saccharomyces paradoxus 22689_YPR196W I 0.612
8988_Multiple Saccharomyces mikatae 8988_Multiple I 0.597
8996_Multiple Saccharomyces mikatae 8996_Multiple I 0.597
9515_Multiple Saccharomyces paradoxus 9515_Multiple I 0.597
9523_Multiple Saccharomyces paradoxus 9523_Multiple I 0.597
ANIA_07343 Aspergillus nidulans CADANIAG00000090 D 0.554
MAL63_YEASX Saccharomyces cerevisiae MAL63_YEASX D 0.597
SKUD_144802 Saccharomyces kudriavzevii SKUD_144802 I 0.597
SKUD_186105 Saccharomyces kudriavzevii SKUD_186105 I 0.580