fgenesh1_pg.00866_#_590 (Aspergillus carbonarius)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00172 (Zn_clus) IPR001138 fgenesh1_pg.00866_#_590 T391303_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ANIA_08125
M01359_2.00 		Aspergillus nidulans
NNYCGGNNNN
NNNNCCGRNN		 PBM
Lambert et al.(2019)
pEX0410 		0.636 0.947
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pg.00866_#_590 Zinc cluster 50 89

Links

Other Zinc cluster family TFs
Other Aspergillus carbonarius TFs

61 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Al_scaffold_0006_2242 Arabidopsis lyrata Al_scaffold_0006_2242 N 0.000
AT5G23650 Arabidopsis thaliana AT5G23650 N 0.000
Bo2g160810 Brassica oleracea Bo2g160810 N 0.000
Bostr.10199s0068 Boechera stricta Bostr.10199s0068 I 0.000
Bostr.13129s0103 Boechera stricta Bostr.13129s0103 I 0.000
Bra009699 Brassica rapa Bra009699 I 0.000
Bra029380 Brassica rapa Bra029380 N 0.000
Cagra.1365s0066 Capsella grandiflora Cagra.1365s0066 I 0.000
Cagra.25796s0001 Capsella grandiflora Cagra.25796s0001 I 0.000
Carubv10001525m.g Capsella rubella Carubv10001525m.g I 0.000
Carubv10003231m.g Capsella rubella Carubv10003231m.g I 0.000
fgenesh2_kg.6__825__AT5G08520.1 Arabidopsis lyrata fgenesh2_kg.6__825__AT5G08520.1 I 0.000
SRM1 Arabidopsis thaliana AT5G08520 D 0.000
Thhalv10005383m.g Eutrema salsugineum Thhalv10005383m.g I 0.000
Thhalv10014203m.g Eutrema salsugineum Thhalv10014203m.g I 0.000