Bo9g104770 (Brassica oleracea)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 Bo9g104770 T000963_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DREB1D
M06678_2.00 		Arabidopsis thaliana
NHBRCCGACRTNN
NNAYGTCGGYVDN		 Dap-seq
OMalley et al.(2016)
CBF4_col_a 		0.839 1.000
DREB1D
M06679_2.00 		Arabidopsis thaliana
HYRCCGACATND
HNATGTCGGYRD		 Dap-seq
OMalley et al.(2016)
CBF4_colamp_a 		0.839 1.000
DREB1C
M01623_2.00 		Arabidopsis thaliana
RCCGACAT
ATGTCGGY		 PBM
Weirauch et al.(2014)
pTH8187 		0.800 0.920
DREB1C
M06639_2.00 		Arabidopsis thaliana
NNNHBRCCGACATNN
NNATGTCGGYVDNNN		 Dap-seq
OMalley et al.(2016)
CBF2_col_a 		0.800 0.920
DREB1C
M06640_2.00 		Arabidopsis thaliana
NYBRCCGACATVN
NBATGTCGGYVRN		 Dap-seq
OMalley et al.(2016)
CBF2_colamp_a 		0.800 0.920
DREB1A
M01624_2.00 		Arabidopsis thaliana
NRCCGACNNN
NNNGTCGGYN		 PBM
Weirauch et al.(2014)
pTH8163 		0.778 0.940
DREB1A
M01625_2.00 		Arabidopsis thaliana
NNRCCGACNW
WNGTCGGYNN		 PBM
Weirauch et al.(2014)
pTH9718 		0.778 0.940
DREB1A
M06641_2.00 		Arabidopsis thaliana
HNYBRCCGACDWNN
NNWHGTCGGYVRND		 Dap-seq
OMalley et al.(2016)
CBF3_col_a 		0.778 0.940
DREB1A
M06642_2.00 		Arabidopsis thaliana
YBRCCGACATN
NATGTCGGYVR		 Dap-seq
OMalley et al.(2016)
CBF3_colamp_a 		0.778 0.940
DREB1B
M06643_2.00 		Arabidopsis thaliana
DHBRCCGACRHN
NDYGTCGGYVDH		 Dap-seq
OMalley et al.(2016)
CBF1_col_a 		0.715 0.940
DREB1B
M06644_2.00 		Arabidopsis thaliana
NNNHBRCCGACAWNN
NNWTGTCGGYVDNNN		 Dap-seq
OMalley et al.(2016)
CBF1_colamp_a 		0.715 0.940
DREB1G
M01635_2.00 		Oryza sativa
NYGCCGACAN
NTGTCGGCRN		 PBM
Weirauch et al.(2014)
pTH8352 		0.714 0.800
DREB1G
M09707_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB1G_01 		0.714 0.800
DREB1F
M00962_2.00 		Arabidopsis thaliana
NRCCGACNN
NNGTCGGYN		 PBM
LehtiShiu et al.(2015)
DDF1_Arabidopsis_thaliana 		0.701 0.760
DREB1F
M00840_2.00 		Arabidopsis thaliana
NRYCGACNN
NNGTCGRYN		 PBM
Franco-Zorrilla et al.(2014)
DDF1 		0.701 0.760
DDF1
M00964_2.00 		Arabidopsis lyrata
NRYCGACDY
RHGTCGRYN		 PBM
LehtiShiu et al.(2015)
DDF1_Arabidopsis_lyrata 		0.701 0.760
DREB1F
M06564_2.00 		Arabidopsis thaliana
NHNHYGYCGACATNN
NNATGTCGRCRDNDN		 Dap-seq
OMalley et al.(2016)
DDF1_col_a 		0.701 0.760
DREB1F
M06565_2.00 		Arabidopsis thaliana
HNDNNRYCGACAH
DTGTCGRYNNHND		 Dap-seq
OMalley et al.(2016)
DDF1_colamp_a 		0.701 0.760
DREB1F
M09701_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB1F_03 		0.701 0.760
DREB1E
M09709_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB1E_01 		0.700 0.800
Q8S2T3_BRANA
M09745_2.00 		Brassica napus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CBF16_01 		0.699 0.880
Q6T3U0_BRANA
M09743_2.00 		Brassica napus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREBII1_01 		0.699 0.880
Q8S2T5_BRANA
M09746_2.00 		Brassica napus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CBF5_01 		0.693 0.900
ddf2
M00965_2.00 		Arabidopsis lyrata
NRYCGACAT
ATGTCGRYN		 PBM
LehtiShiu et al.(2015)
DDF2_Arabidopsis_lyrata 		0.678 0.760
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo9g104770.1 AP2 52 103

Links

Other AP2 family TFs
Other Brassica oleracea TFs

216 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACRE_019440 Acremonium chrysogenum ACRE_019440 I
ACRE_020490 Acremonium chrysogenum ACRE_020490 I
ACRE_030130 Acremonium chrysogenum ACRE_030130 I
AB00861.1 Alternaria brassicicola AB00861.1 I
ARB_01292 Arthroderma benhamiae ARB_01292 I
MCYG_05794 Arthroderma otae MCYG_05794 I
fgenesh1_pm.00129_#_214 Aspergillus carbonarius fgenesh1_pm.00129_#_214 I
ACLA_030770 Aspergillus clavatus CADACLAG00002327 I
AFUA_1G03800 Aspergillus fumigatus CADAFUAG00009294 I
ANIA_10504 Aspergillus nidulans CADANIAG00004652 I
CADANGAG00014030 Aspergillus niger CADANGAG00014030 I
ATEG_03831 Aspergillus terreus CADATEAG00008906 I
M437DRAFT_65869 Aureobasidium melanogenum M437DRAFT_65869 I
M438DRAFT_32848 Aureobasidium pullulans M438DRAFT_32848 I
AUEXF2481DRAFT_27177 Aureobasidium subglaciale AUEXF2481DRAFT_27177 I
BAUCODRAFT_63686 Baudoinia compniacensis BAUCODRAFT_63686 I
BBA_01669 Beauveria bassiana BBA_01669 I
COCMIDRAFT_5378 Bipolaris oryzae COCMIDRAFT_5378 I
COCSADRAFT_142075 Bipolaris sorokiniana COCSADRAFT_142075 I
COCVIDRAFT_97148 Bipolaris victoriae COCVIDRAFT_97148 I
COCCADRAFT_98777 Bipolaris zeicola COCCADRAFT_98777 I
Bcin05g02960 Botrytis cinerea Bcin05g02960 I
Bcin16g00320 Botrytis cinerea Bcin16g00320 I
A1O1_06649 Capronia coronata A1O1_06649 I
A1O3_10484 Capronia epimyces A1O3_10484 I
PV04_02129 Capronia semiimmersa PV04_02129 I
CHGG_02020 Chaetomium globosum CHGG_02020 I
Z519_12694 Cladophialophora bantiana Z519_12694 I
G647_09757 Cladophialophora carrionii G647_09757 I
PV07_02419 Cladophialophora immunda PV07_02419 I
A1O5_10159 Cladophialophora psammophila A1O5_10159 I
A1O7_01941 Cladophialophora yegresii A1O7_01941 I
CPUR_05074 Claviceps purpurea CPUR_05074 I
CIMG_04610 Coccidioides immitis CIMG_04610 I
CPC735_071910 Coccidioides posadasii CPC735_071910 I
estExt_Genewise1Plus.C_270154 Cochliobolus heterostrophus C5 estExt_Genewise1Plus.C_270154 I
CFIO01_06708 Colletotrichum fioriniae CFIO01_06708 I
GLRG_00909 Colletotrichum graminicola GLRG_00909 I
CH063_12126 Colletotrichum higginsianum CH063_12126 I
Cob_07183 Colletotrichum orbiculare Cob_07183 I
CSUB01_10649 Colletotrichum sublineola CSUB01_10649 I
CCM_09011 Cordyceps militaris CCM_09011 I
estExt_Genewise1Plus.C_41920 Cryphonectria parasitica estExt_Genewise1Plus.C_41920 I
HMPREF1541_07144 Cyphellophora europaea HMPREF1541_07144 I
DOTSEDRAFT_127076 Dothistroma septosporum DOTSEDRAFT_127076 I
UCREL1_10592 Eutypa lata UCREL1_10592 I
UCREL1_7993 Eutypa lata UCREL1_7993 I
A1O9_06866 Exophiala aquamarina A1O9_06866 I
HMPREF1120_04361 Exophiala dermatitidis HMPREF1120_04361 I
PV06_07997 Exophiala oligosperma PV06_07997 I
PV11_03531 Exophiala sideris PV11_03531 I
PV05_07659 Exophiala xenobiotica PV05_07659 I
PV05_10700 Exophiala xenobiotica PV05_10700 I
Z517_00016 Fonsecaea pedrosoi Z517_00016 I
FFUJ_00433 Fusarium fujikuroi FFUJ_00433 I
FFUJ_04592 Fusarium fujikuroi FFUJ_04592 I
FFUJ_10471 Fusarium fujikuroi FFUJ_10471 I
FGRRES_00800 Fusarium graminearum FGRRES_00800 I
FGRRES_16250 Fusarium graminearum FGRRES_16250 I
FGRRES_17664 Fusarium graminearum FGRRES_17664 I
FOXG_01137 Fusarium oxysporum FOXG_01137 I
FOXG_16650 Fusarium oxysporum FOXG_16650 I
FPSE_09263 Fusarium pseudograminearum FPSE_09263 I
FPSE_12020 Fusarium pseudograminearum FPSE_12020 I
FPSE_12440 Fusarium pseudograminearum FPSE_12440 I
NechaG11213 Fusarium solani NechaG11213 I
NechaG65901 Fusarium solani NechaG65901 I
NechaG88015 Fusarium solani NechaG88015 I
NechaG91416 Fusarium solani NechaG91416 I
FVEG_00379 Fusarium verticillioides FVEG_00379 I
FVEG_13591 Fusarium verticillioides FVEG_13591 I
GGTG_03334 Gaeumannomyces graminis GGTG_03334 I
CMQ_5979 Grosmannia clavigera CMQ_5979 I
LEMA_P067510.1 Leptosphaeria maculans LEMA_P067510.1 I
MPH_06231 Macrophomina phaseolina MPH_06231 I
MPH_09781 Macrophomina phaseolina MPH_09781 I
MAPG_01446 Magnaporthe poae MAPG_01446 I
MAC_05495 Metarhizium acridum MAC_05495 I
MAM_07411 Metarhizium album MAM_07411 I
MANI_000308 Metarhizium anisopliae MANI_000308 I
MBR_00159 Metarhizium brunneum MBR_00159 I
MGU_09666 Metarhizium guizhouense MGU_09666 I
X797_002513 Metarhizium robertsii X797_002513 I
MCYG_05794 Microsporum canis MCYG_05794 I
MGYG_02900 Microsporum gypseum MGYG_02900 I
MYCTH_2307957 Myceliophthora thermophila MYCTH_2307957 I
e_gw1.9.518.1 Mycosphaerella fijiensis e_gw1.9.518.1 I
e_gw1.1.2059.1 Mycosphaerella graminicola e_gw1.1.2059.1 I
estExt_Genewise1Plus.C_sca_1_chr1_3_01292 Nectria haematococca estExt_Genewise1Plus.C_sca_1_chr1_3_01292 I
fgenesh1_pg.sca_76_chr13_2_0000013 Nectria haematococca fgenesh1_pg.sca_76_chr13_2_0000013 I
fgenesh1_pm.sca_26_chr2_2_0000019 Nectria haematococca fgenesh1_pm.sca_26_chr2_2_0000019 I
gw1.18.787.1 Nectria haematococca gw1.18.787.1 I
UCRNP2_6697 Neofusicoccum parvum UCRNP2_6697 I
NFIA_020870 Neosartorya fischeri CADNFIAG00001734 I
ada-3 Neurospora crassa NCU02896 D
estExt_Genewise1Plus.C_40406 Neurospora discreta estExt_Genewise1Plus.C_40406 I
NEUTE1DRAFT_92483 Neurospora tetrasperma NEUTE1DRAFT_92483 I
F503_07593 Ophiostoma piceae uamh F503_07593 I
F503_08863 Ophiostoma piceae uamh F503_08863 I
Pc16g08180 Penicillium chrysogenum Pc16g08180 I
PEX1_002120 Penicillium expansum PEX1_002120 I
PITC_030780 Penicillium italicum PITC_030780 I
PITC_068620 Penicillium italicum PITC_068620 I
PMAA_055120 Penicillium marneffei PMAA_055120 I
PCH_Pc16g08180 Penicillium rubens PCH_Pc16g08180 I
U727_00434000191 Penicillium solitum U727_00434000191 I
PFICI_03077 Pestalotiopsis fici PFICI_03077 I
SNOG_00466 Phaeosphaeria nodorum SNOG_00466 I
PODANS_1_1340 Podospora anserina PODANS_1_1340 I
MYCFIDRAFT_36148 Pseudocercospora fijiensis MYCFIDRAFT_36148 I
PTT_13784 Pyrenophora teres PTT_13784 I
PTRG_10316 Pyrenophora triticirepentis PTRG_10316 I
Z518_05417 Rhinocladiella mackenziei Z518_05417 I
SAPIO_CDS1279 Scedosporium apiospermum SAPIO_CDS1279 I
SBOR_5952 Sclerotinia borealis SBOR_5952 I
SS1G_02138 Sclerotinia sclerotiorum SS1G_02138 I
SETTUDRAFT_19016 Setosphaeria turcica SETTUDRAFT_19016 I
SMAC_00550 Sordaria macrospora SMAC_00550 I
SEPMUDRAFT_148059 Sphaerulina musiva SEPMUDRAFT_148059 I
SPBR_02264 Sporothrix brasiliensis SPBR_02264 I
SPBR_06491 Sporothrix brasiliensis SPBR_06491 I
HMPREF1624_06736 Sporothrix schenckii HMPREF1624_06736 I
HMPREF1624_08785 Sporothrix schenckii HMPREF1624_08785 I
S40288_07746 Stachybotrys chartarum S40288_07746 I
S40285_01095 Stachybotrys chlorohalonata S40285_01095 I
SNOG_00466 Stagonospora nodorum SNOG_00466 I
PMAA_055120 Talaromyces marneffei PMAA_055120 I
TSTA_017770 Talaromyces stipitatus TSTA_017770 I
THITE_123221 Thielavia terrestris THITE_123221 I
UCRPA7_8612 Togninia minima UCRPA7_8612 I
VHEMI02844 Torrubiella hemipterigena VHEMI02844 I
VHEMI05094 Torrubiella hemipterigena VHEMI05094 I
TRIATDRAFT_172200 Trichoderma atroviride TRIATDRAFT_172200 I
TRIREDRAFT_62297 Trichoderma reesei TRIREDRAFT_62297 I
TRIVIDRAFT_113147 Trichoderma virens TRIVIDRAFT_113147 I
TEQG_00822 Trichophyton equinum TEQG_00822 I
H101_06954 Trichophyton interdigitale H101_06954 I
H105_02238 Trichophyton soudanense H105_02238 I
TRV_01165 Trichophyton verrucosum TRV_01165 I
UREG_01815 Uncinocarpus reesii UREG_01815 I
UV8b_5957 Ustilaginoidea virens UV8b_5957 I
PV09_00486 Verruconis gallopava PV09_00486 I
VDBG_09581 Verticillium albo atrum VDBG_09581 I
VDBG_09581 Verticillium alfalfae VDBG_09581 I
VDAG_04814 Verticillium dahliae VDAG_04814 I
VDAG_06235 Verticillium dahliae VDAG_06235 I
Mycgr3G33662 Zymoseptoria tritici Mycgr3G33662 I