GSMUA_Achr3G04360_001 (Musa acuminata)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 GSMUA_Achr3G04360_001 T002342_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAP2-4
M01612_2.00 		Arabidopsis thaliana
NRCCGHCMNN
NNKGDCGGYN		 PBM
Weirauch et al.(2014)
pTH8092 		0.836 0.900
ERF055
M06577_2.00 		Arabidopsis thaliana
NHDYCACCGHCMHH
DDKGDCGGTGRHDN		 Dap-seq
OMalley et al.(2016)
At1g36060_col_a 		0.823 0.880
ERF055
M06578_2.00 		Arabidopsis thaliana
NHDYCACCGHCMHH
DDKGDCGGTGRHDN		 Dap-seq
OMalley et al.(2016)
At1g36060_colamp_a 		0.823 0.880
AT5G65130
M06686_2.00 		Arabidopsis thaliana
YCDYCDCCRCCGCCN
NGGCGGYGGHGRHGR		 Dap-seq
OMalley et al.(2016)
At5g65130_col_a 		0.713 0.860
AT5G65130
M06687_2.00 		Arabidopsis thaliana
NNNNHNNHDSCRCCGMCMW
WKGKCGGYGSHDNNDNNNN		 Dap-seq
OMalley et al.(2016)
At5g65130_colamp_a 		0.713 0.860
WIN1
M01603_2.00 		Arabidopsis thaliana
VCRCCGCNNN
NNNGCGGYGB		 PBM
Weirauch et al.(2014)
pTH7566 		0.677 0.620
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr3P04360_001 AP2 140 191

Links

Other AP2 family TFs
Other Musa acuminata TFs

448 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_004_00748 Aquilegia coerulea Aquca_004_00748 I
Aquca_081_00012 Aquilegia coerulea Aquca_081_00012 I
scaffold_402920.1 Arabidopsis lyrata scaffold_402920.1 N
fgenesh2_kg.5__2108__AT3G56770.1 Arabidopsis lyrata fgenesh2_kg.5__2108__AT3G56770.1 N
BHLH106 Arabidopsis thaliana AT2G41130 N
Bostr.20505s0075 Boechera stricta Bostr.20505s0075 N
Bostr.9345s0019 Boechera stricta Bostr.9345s0019 N
BRADI1G04280 Brachypodium distachyon BRADI1G04280 N
BRADI2G07050 Brachypodium distachyon BRADI2G07050 N
Bo3g035410 Brassica oleracea Bo3g035410 N
Bo4g190700 Brassica oleracea Bo4g190700 N
Bo4g112750 Brassica oleracea Bo4g112750 N
Bo4g012960 Brassica oleracea Bo4g012960 N
Bra016951 Brassica rapa Bra016951 N
Bra004599 Brassica rapa Bra004599 N
Bra014672 Brassica rapa Bra014672 N
PK23387.1 Cannabis sativa PK23387.1 N
Cagra.1642s0077 Capsella grandiflora Cagra.1642s0077 N
Cagra.0578s0007 Capsella grandiflora Cagra.0578s0007 N
Carubv10023903m.g Capsella rubella Carubv10023903m.g N
evm.TU.supercontig_92.83 Carica papaya evm.TU.supercontig_92.83 N
Ca_07159 Cicer arietinum Ca_07159 N
Cla017413 Citrullus lanatus Cla017413 N
Cla019977 Citrullus lanatus Cla019977 I
Ciclev10012626m.g Citrus clementina Ciclev10012626m.g N
orange1.1g026479m.g Citrus sinensis orange1.1g026479m.g N
Cucsa.213230 Cucumis sativus Cucsa.213230 I
Cucsa.340200 Cucumis sativus Cucsa.340200 N
Eucgr.E02743 Eucalyptus grandis Eucgr.E02743 I
Eucgr.A02230 Eucalyptus grandis Eucgr.A02230 N
Thhalv10006410m.g Eutrema salsugineum Thhalv10006410m.g N
Thhalv10017546m.g Eutrema salsugineum Thhalv10017546m.g N
gene14814-v1.0-hybrid Fragaria vesca gene14814-v1.0-hybrid N
GLYMA02G23590 Glycine max GLYMA02G23590 N
GLYMA19G30910 Glycine max GLYMA19G30910 N
GLYMA03G28150 Glycine max GLYMA03G28150 N
Gorai.007G352300 Gossypium raimondii Gorai.007G352300 N
Gorai.009G163400 Gossypium raimondii Gorai.009G163400 I
Lus10018020.g Linum usitatissimum Lus10018020.g N
Lus10042017.g Linum usitatissimum Lus10042017.g N
chr1.CM0816.330.nc Lotus japonicus chr1.CM0816.330.nc N
MDP0000249969 Malus domestica MDP0000249969 I
MDP0000213892 Malus domestica MDP0000213892 N
MDP0000138102 Malus domestica MDP0000138102 N
cassava7163.valid.m1 Manihot esculenta cassava7163.valid.m1 N
cassava32077.m1 Manihot esculenta cassava32077.m1 I
cassava18812.valid.m1 Manihot esculenta cassava18812.valid.m1 I
mgf009382m Mimulus guttatus mgf009382m N
GSMUA_Achr8G23980_001 Musa acuminata GSMUA_Achr8G23980_001 N
ORGLA03G0352000 Oryza glaberrima ORGLA03G0352000 N
OS03G0811400 Oryza sativa OS03G0811400 N
Pavir.J24868 Panicum virgatum Pavir.J24868 N
Pavir.J02699 Panicum virgatum Pavir.J02699 N
POPTR_0006s03550 Populus trichocarpa POPTR_0006s03550 N
POPTR_0016s03460 Populus trichocarpa POPTR_0016s03460 N
Pm025589 Prunus mume Pm025589 N
PRUPE_ppa011532mg Prunus persica PRUPE_ppa011532mg N
30180.m001071 Ricinus communis 30180.m001071 N
SapurV1A.0159s0020 Salix purpurea SapurV1A.0159s0020 N
SapurV1A.0189s0140 Salix purpurea SapurV1A.0189s0140 N
SapurV1A.1185s0010 Salix purpurea SapurV1A.1185s0010 I
SapurV1A.1821s0030 Salix purpurea SapurV1A.1821s0030 I
Solyc10g078380.1 Solanum lycopersicum Solyc10g078380.1 N
PGSC0003DMG400008378 Solanum tuberosum PGSC0003DMG400008378 N
Sb01g003830 Sorghum bicolor Sb01g003830 N
TCM_024016 Theobroma cacao TCM_024016 N
TCM_029711 Theobroma cacao TCM_029711 I
Traes_5BL_CBFAD4B59 Triticum aestivum Traes_5BL_CBFAD4B59 N
VIT_08s0040g01240 Vitis vinifera VIT_08s0040g01240 I
VIT_14s0068g01580 Vitis vinifera VIT_14s0068g01580 I
GRMZM2G027068 Zea mays GRMZM2G027068 N