GSMUA_Achr4G32280_001 (Musa acuminata)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 GSMUA_Achr4G32280_001 T002389_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q6SA75_TOBAC
M09733_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ANTL_01 		0.905 0.915
Q6SA75_TOBAC
M09734_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ANTL_02 		0.905 0.915
ANT
M02647_2.00 		Arabidopsis thaliana
DNRCACRNWTCCCVADGYNHW
WDNRCHTBGGGAWNYGTGYNH		 SELEX
Mathelier et al.(2014)
MA0571.1 		0.882 0.877
ANT
M09705_2.00 		Arabidopsis thaliana
CACRNWTCCCRAKG
CMTYGGGAWNYGTG		 Transfac
Matys et al.(2006)
P$ANT_01 		0.882 0.877
PLT1
M06622_2.00 		Arabidopsis thaliana
DDCACGNWWHYCRAGRHNN
NNDYCTYGRDWWNCGTGHH		 Dap-seq
OMalley et al.(2016)
PLT1_col_a 		0.855 0.858
PLT1
M06623_2.00 		Arabidopsis thaliana
DYDCRNWTYYCRAG
CTYGRRAWNYGHRH		 Dap-seq
OMalley et al.(2016)
PLT1_colamp_a 		0.855 0.858
AIL7
M06688_2.00 		Arabidopsis thaliana
CRNWTHYCRAG
CTYGRDAWNYG		 Dap-seq
OMalley et al.(2016)
AIL7_col_a 		0.799 0.821
AIL7
M06689_2.00 		Arabidopsis thaliana
DCRNWTHYCRAG
CTYGRDAWNYGH		 Dap-seq
OMalley et al.(2016)
AIL7_colamp_a 		0.799 0.821
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr4P32280_001 AP2 154 214
GSMUA_Achr4P32280_001 AP2 256 308

Links

Other AP2 family TFs
Other Musa acuminata TFs

649 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000003587 Ailuropoda melanoleuca ENSAMEG00000003587 I
ZFP14 Callithrix jacchus ENSCJAG00000033866 I
ZFP14 Canis familiaris ENSCAFG00000029949 I
ENSCPOG00000013045 Cavia porcellus ENSCPOG00000013045 I
ENSCSAG00000004219 Chlorocebus sabaeus ENSCSAG00000004219 I
ZFP14 Choloepus hoffmanni ENSCHOG00000002471 I
ZFP14 Dasypus novemcinctus ENSDNOG00000005338 I
ZFP14 Echinops telfairi ENSETEG00000007463 I
ZFP14 Equus caballus ENSECAG00000021751 I
ZFP14 Gorilla gorilla ENSGGOG00000013664 I
ZFP14 Homo sapiens ENSG00000142065 D
ENSSTOG00000020595 Ictidomys tridecemlineatus ENSSTOG00000020595 I
ZFP14 Loxodonta africana ENSLAFG00000013621 I
ENSMMUP00000028553 Macaca fascicularis ENSMMUP00000028553 I
ZFP14 Macaca mulatta ENSMMUG00000021686 I
ZFP82 Microcebus murinus ENSMICG00000006314 I
Zfp14 Mus musculus ENSMUSG00000053985 I
Myotis_brandtii_ZFP14_10004810 Myotis brandtii Myotis_brandtii_ZFP14_10004810 I
ENSNLEG00000003048 Nomascus leucogenys ENSNLEG00000003048 I
ZFP14 Oryctolagus cuniculus ENSOCUG00000017838 I
ZFP14 Otolemur garnettii ENSOGAG00000008384 I
ZFP14 Pan troglodytes ENSPTRG00000010893 I
ENSPANG00000004843 Papio anubis ENSPANG00000004843 I
ENSPPYG00000010535 Pongo abelii ENSPPYG00000010535 I
ZFP14 Pteropus vampyrus ENSPVAG00000003062 I
Zfp82 Rattus norvegicus ENSRNOG00000030932 I
ZFP14 Sorex araneus ENSSARG00000003380 I
ENSSSCG00000026429 Sus scrofa ENSSSCG00000026429 I
ZFP14 Tupaia belangeri ENSTBEG00000010678 I
ZFP14 Vicugna pacos ENSVPAG00000008943 I