MTR_3g106290 (Medicago truncatula)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 MTR_3g106290 T002840_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF003
M06667_2.00 		Arabidopsis thaliana
DYCDCCRCCGYMDHHDYHN
NDRHDDHKRCGGYGGHGRH		 Dap-seq
OMalley et al.(2016)
ESE3_col_a 		0.849 0.941
ERF003
M06668_2.00 		Arabidopsis thaliana
HDYCKCCGCCGYHDH
DHDRCGGCGGMGRHD		 Dap-seq
OMalley et al.(2016)
ESE3_colamp_a 		0.849 0.941
WIN1
M01603_2.00 		Arabidopsis thaliana
VCRCCGCNNN
NNNGCGGYGB		 PBM
Weirauch et al.(2014)
pTH7566 		0.728 0.804
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AES73570 AP2 6 57

Links

Other AP2 family TFs
Other Medicago truncatula TFs

297 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_006_00004 Aquilegia coerulea Aquca_006_00004 I 0.742
SHN1 Arabidopsis lyrata fgenesh2_kg.1__1687__AT1G15360.1 I 0.728
WIN1 Arabidopsis thaliana AT1G15360 D 0.728
Bostr.7128s0149 Boechera stricta Bostr.7128s0149 I 0.728
BRADI5G24720 Brachypodium distachyon BRADI5G24720 I 0.745
Bo00615s260 Brassica oleracea Bo00615s260 I 0.710
Bo8g066410 Brassica oleracea Bo8g066410 I 0.728
Bo8g106100 Brassica oleracea Bo8g106100 I 0.716
Bra016663 Brassica rapa Bra016663 I 0.728
Bra026140 Brassica rapa Bra026140 I 0.728
Cagra.2238s0086 Capsella grandiflora Cagra.2238s0086 I 0.728
Carubv10010317m.g Capsella rubella Carubv10010317m.g I 0.728
Cla012435 Citrullus lanatus Cla012435 I 0.745
Cla012914 Citrullus lanatus Cla012914 I 0.704
Cla021283 Citrullus lanatus Cla021283 I 0.688
Ciclev10027305m.g Citrus clementina Ciclev10027305m.g I 0.746
Cucsa.310360 Cucumis sativus Cucsa.310360 I 0.688
Cucsa.292670 Cucumis sativus Cucsa.292670 I 0.733
Eucgr.C04221 Eucalyptus grandis Eucgr.C04221 I 0.739
Thhalv10008845m.g Eutrema salsugineum Thhalv10008845m.g I 0.728
Thhalv10015363m.g Eutrema salsugineum Thhalv10015363m.g I 0.708
GLYMA15G01140 Glycine max GLYMA15G01140 I 0.726
LPERR04G23560 Leersia perrieri LPERR04G23560 I 0.684
Lus10005343.g Linum usitatissimum Lus10005343.g I 0.736
chr4.LjT07P17.60.nc Lotus japonicus chr4.LjT07P17.60.nc I 0.749
LjSGA_040388.1 Lotus japonicus LjSGA_040388.1 I 0.724
MDP0000290880 Malus domestica MDP0000290880 I 0.732
MDP0000124316 Malus domestica MDP0000124316 I 0.732
cassava11389.m1 Manihot esculenta cassava11389.m1 I 0.746
MTR_1g090170 Medicago truncatula MTR_1g090170 I 0.681
GSMUA_Achr10G24170_001 Musa acuminata GSMUA_Achr10G24170_001 I 0.739
GSMUA_Achr6G05210_001 Musa acuminata GSMUA_Achr6G05210_001 I 0.728
NBR_0001834801 Nippostrongylus brasiliensis NBR_0001834801 I 0.000
OPUNC04G25430 Oryza punctata OPUNC04G25430 I 0.722
POPTR_0017s08250 Populus trichocarpa POPTR_0017s08250 I 0.679
SHN1 Populus trichocarpa POPTR_0003s02750 I 0.746
SapurV1A.0034s0630 Salix purpurea SapurV1A.0034s0630 I 0.749
SapurV1A.1759s0040 Salix purpurea SapurV1A.1759s0040 I 0.746
SapurV1A.0199s0350 Salix purpurea SapurV1A.0199s0350 I 0.746
SELMODRAFT_15839 Selaginella moellendorffii SELMODRAFT_15839 I 0.677
SELMODRAFT_73160 Selaginella moellendorffii SELMODRAFT_73160 I 0.682
Solyc03g116610.2 Solanum lycopersicum Solyc03g116610.2 I 0.728
Solyc12g009490.1 Solanum lycopersicum Solyc12g009490.1 I 0.746
PGSC0003DMG400002889 Solanum tuberosum PGSC0003DMG400002889 I 0.746
PGSC0003DMG400000636 Solanum tuberosum PGSC0003DMG400000636 I 0.728
L596_g14596 Steinernema carpocapsae L596_g14596 I 0.000
L596_g14590 Steinernema carpocapsae L596_g14590 I 0.000
L596_g14532 Steinernema carpocapsae L596_g14532 I 0.000
L596_g14533 Steinernema carpocapsae L596_g14533 I 0.000
L596_g14536 Steinernema carpocapsae L596_g14536 I 0.000
L596_g14537 Steinernema carpocapsae L596_g14537 I 0.000
L596_g14578 Steinernema carpocapsae L596_g14578 N 0.000
L889_g6792 Steinernema feltiae L889_g6792 I 0.000
L889_g6798 Steinernema feltiae L889_g6798 I 0.000
L889_g6804 Steinernema feltiae L889_g6804 I 0.000
L889_g8187 Steinernema feltiae L889_g8187 I 0.000
L889_g8185 Steinernema feltiae L889_g8185 I 0.000
L889_g6803 Steinernema feltiae L889_g6803 N 0.000
L889_g6694 Steinernema feltiae L889_g6694 I 0.000
L889_g6692 Steinernema feltiae L889_g6692 I 0.000
L889_g6695 Steinernema feltiae L889_g6695 I 0.000
L893_g27930 Steinernema glaseri L893_g27930 I 0.000
L893_g27943 Steinernema glaseri L893_g27943 N 0.000
L893_g27935 Steinernema glaseri L893_g27935 N 0.000
L893_g18993 Steinernema glaseri L893_g18993 I 0.000
L893_g18992 Steinernema glaseri L893_g18992 I 0.000
L898_g4018 Steinernema monticolum L898_g4018 N 0.000
L898_g4016 Steinernema monticolum L898_g4016 N 0.000
L898_g4015 Steinernema monticolum L898_g4015 N 0.000
L898_g4012 Steinernema monticolum L898_g4012 I 0.000
L898_g3515 Steinernema monticolum L898_g3515 I 0.000
L898_g32142 Steinernema monticolum L898_g32142 N 0.000
L898_g2944 Steinernema monticolum L898_g2944 N 0.000
L898_g2943 Steinernema monticolum L898_g2943 N 0.000
L898_g21763 Steinernema monticolum L898_g21763 I 0.000
L898_g20180 Steinernema monticolum L898_g20180 I 0.000
L898_g19021 Steinernema monticolum L898_g19021 I 0.000
L898_g19019 Steinernema monticolum L898_g19019 I 0.000
L898_g19014 Steinernema monticolum L898_g19014 I 0.000
L898_g12799 Steinernema monticolum L898_g12799 I 0.000
L898_g19012 Steinernema monticolum L898_g19012 I 0.000
L892_g10843 Steinernema scapterisci L892_g10843 I 0.000
L892_g10840 Steinernema scapterisci L892_g10840 N 0.000
L892_g2781 Steinernema scapterisci L892_g2781 I 0.000
L892_g2780 Steinernema scapterisci L892_g2780 I 0.000
L892_g14825 Steinernema scapterisci L892_g14825 I 0.000
L892_g14824 Steinernema scapterisci L892_g14824 N 0.000
L892_g14818 Steinernema scapterisci L892_g14818 I 0.000
L892_g14817 Steinernema scapterisci L892_g14817 I 0.000
L892_g14814 Steinernema scapterisci L892_g14814 N 0.000
L892_g10842 Steinernema scapterisci L892_g10842 I 0.000
Traes_2DL_CB03F0D2A Triticum aestivum Traes_2DL_CB03F0D2A I 0.724
Traes_7BL_EB1DCAB4B Triticum aestivum Traes_7BL_EB1DCAB4B I 0.684
Traes_7BS_51188D64E Triticum aestivum Traes_7BS_51188D64E I 0.743
SHN1 Vitis vinifera VIT_09s0002g06750 I 0.723
GRMZM2G106591 Zea mays GRMZM2G106591 I 0.746