OGLUM09G04680 (Oryza glumaepatula)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 OGLUM09G04680 T003306_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
A5JTT1_WHEAT
M09700_2.00 		Triticum aestivum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ERF3_01 		0.706 0.674
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OGLUM09G04680.1 AP2 113 161

Links

Other AP2 family TFs
Other Oryza glumaepatula TFs

51 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BRADI2G11890 Brachypodium distachyon BRADI2G11890 I 0.678
Eucgr.K02780 Eucalyptus grandis Eucgr.K02780 I 0.694
Eucgr.K02193 Eucalyptus grandis Eucgr.K02193 I 0.694
MLOC_51143 Hordeum vulgare MLOC_51143 I 0.703
LPERR09G02820 Leersia perrieri LPERR09G02820 I 0.748
LPERR09G02840 Leersia perrieri LPERR09G02840 I 0.677
mgf021642m Mimulus guttatus mgf021642m I 0.681
OBART01G06430 Oryza barthii OBART01G06430 I 0.705
OB09G12530 Oryza brachyantha OB09G12530 I 0.683
ORGLA09G0030400 Oryza glaberrima ORGLA09G0030400 I 0.707
ORGLA09G0030300 Oryza glaberrima ORGLA09G0030300 I 0.845
ORGLA01G0108600 Oryza glaberrima ORGLA01G0108600 I 0.678
OGLUM09G04690 Oryza glumaepatula OGLUM09G04690 I 0.705
BGIOSGA003364 Oryza indica BGIOSGA003364 I 0.678
BGIOSGA038064 Oryza indica BGIOSGA038064 I 0.707
BGIOSGA030065 Oryza indica BGIOSGA030065 I 0.845
OLONG_020978 Oryza longistaminata OLONG_020978 I 0.713
OMERI09G03020 Oryza meridionalis OMERI09G03020 I 0.845
OMERI09G03030 Oryza meridionalis OMERI09G03030 I 0.705
OMERI12G11270 Oryza meridionalis OMERI12G11270 I 0.678
ONIVA09G04180 Oryza nivara ONIVA09G04180 I 0.845
ONIVA09G04210 Oryza nivara ONIVA09G04210 I 0.707
OPUNC01G12900 Oryza punctata OPUNC01G12900 I 0.678
OPUNC09G03530 Oryza punctata OPUNC09G03530 I 0.845
OPUNC09G03540 Oryza punctata OPUNC09G03540 I 0.704
ORUFI09G04400 Oryza rufipogon ORUFI09G04400 I 0.845
ORUFI09G04420 Oryza rufipogon ORUFI09G04420 I 0.705
OS01G0313300 Oryza sativa OS01G0313300 I 0.678
OS09G0286600 Oryza sativa OS09G0286600 I 0.845
OS09G0287000 Oryza sativa OS09G0287000 I 0.705
Pavir.J08480 Panicum virgatum Pavir.J08480 I 0.678
Pavir.Eb02324 Panicum virgatum Pavir.Eb02324 I 0.678
SELMODRAFT_17703 Selaginella moellendorffii SELMODRAFT_17703 I 0.681
SELMODRAFT_73134 Selaginella moellendorffii SELMODRAFT_73134 I 0.681
SELMODRAFT_73164 Selaginella moellendorffii SELMODRAFT_73164 I 0.686
SELMODRAFT_73169 Selaginella moellendorffii SELMODRAFT_73169 I 0.686
Si002845m.g Setaria italica Si002845m.g I 0.678
Solyc03g118190.2 Solanum lycopersicum Solyc03g118190.2 I 0.683
Solyc04g051360.2 Solanum lycopersicum Solyc04g051360.2 I 0.690
PGSC0003DMG400014240 Solanum tuberosum PGSC0003DMG400014240 I 0.683
PGSC0003DMG400019693 Solanum tuberosum PGSC0003DMG400019693 I 0.705
Sb07g022180 Sorghum bicolor Sb07g022180 I 0.681
Sb03g012890 Sorghum bicolor Sb03g012890 I 0.678
Traes_2BS_5E7287209 Triticum aestivum Traes_2BS_5E7287209 I 0.703
TRAES3BF171600010CFD_g Triticum aestivum TRAES3BF171600010CFD_g I 0.678
Traes_5BL_98D063967 Triticum aestivum Traes_5BL_98D063967 I 0.678
Traes_5DL_41E3B1B23 Triticum aestivum Traes_5DL_41E3B1B23 I 0.678
A5JTT1_WHEAT Triticum aestivum A5JTT1_WHEAT D 0.706
Traes_2AS_72E9B68D2 Triticum aestivum Traes_2AS_72E9B68D2 I 0.703
GRMZM2G169382 Zea mays GRMZM2G169382 I 0.678
GRMZM2G053503 Zea mays GRMZM2G053503 I 0.678