CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OMERI03G05920
(
Oryza meridionalis
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
OMERI03G05920
T003420_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
P93392_TOBAC
M09731_2.00
Nicotiana tabacum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$OPBP1_01
0.693
0.735
For this family, TFs with SR scores >
0.677
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OMERI03G05920.1
AP2
96
147
AQYRGVRRRPWGKWAAEIRDPVKGIRVWLGTFTNAEAAALAYDDAARAIRGD
Links
Other
AP2
family TFs
Other
Oryza meridionalis
TFs
156 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Thhalv10015975m.g
Eutrema salsugineum
Thhalv10015975m.g
N
ORGLA05G0184200
Oryza glaberrima
ORGLA05G0184200
N
OLONG_003165
Oryza longistaminata
OLONG_003165
I
ONIVA05G21900
Oryza nivara
ONIVA05G21900
I