CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

OMERI06G22190 *(Oryza meridionalis)* AP2
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00847 (AP2)	IPR001471	OMERI06G22190	T003478_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
Q9XHD4_PETHY M09737_2.00	Petunia x hybrida	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$AP2A_01	0.845	0.888
P93632_MAIZE M09712_2.00	Zea mays	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$GL15_01	0.836	0.959
Q9XHD3_PETHY M09736_2.00	Petunia x hybrida	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$AP2B_01	0.821	0.837
RAP2.7 M00845_2.00	Arabidopsis thaliana	KRCGRGGD	HCCYCGYM	PBM Franco-Zorrilla et al.(2014) TOE1	0.814	0.837
For this family, TFs with SR scores > 0.677* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
OMERI06G22190.1	AP2	94	143	SQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAQAAARAYDQAAIKFRG
OMERI06G22190.1	AP2	186	237	SRFRGVTLHKCGKWEARIGQLMGKKYVYLGLYDTEMEAAKAYDKAAIKCCGK
OMERI06G22190.2	AP2	94	143	SQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAQAAARAYDQAAIKFRG
OMERI06G22190.2	AP2	186	237	SRFRGVTLHKCGKWEARIGQLMGKKYVYLGLYDTEMEAAKAYDKAAIKCCGK

Links
Other AP2 family TFs
Other *Oryza meridionalis* TFs