CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ONIVA09G04180
(
Oryza nivara
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
ONIVA09G04180
T003655_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
A5JTT1_WHEAT
M09700_2.00
Triticum aestivum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ERF3_01
0.706
0.674
For this family, TFs with SR scores >
0.677
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ONIVA09G04180.1
AP2
113
161
PYRGIRQRPWGRWASEIRDPVKGIRVWLGTFDTAEGAARAYDDEVRRIY
Links
Other
AP2
family TFs
Other
Oryza nivara
TFs
51 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GSPATT00008295001
Paramecium tetraurelia
GSPATT00008295001
N
0.000
GSPATT00015930001
Paramecium tetraurelia
GSPATT00015930001
N
0.000
e_gw1.457.7.1
Phytophthora capsici
e_gw1.457.7.1
N
0.000
F443_15766
Phytophthora parasitica
F443_15766
N
0.000
Physo142192
Phytophthora sojae
Physo142192
N
0.000
maker-pag1_scaffold_526-fgenesh-gene-0.3
Pythium aphanidermatum
maker-pag1_scaffold_526-fgenesh-gene-0.3
N
0.000
maker-pve_contig_563-fgenesh-gene-0.8
Pythium vexans
maker-pve_contig_563-fgenesh-gene-0.8
N
0.000