CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Sb02g030310
(
Sorghum bicolor
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
Sb02g030310
T004969_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Q8GZQ2_MAIZE
M09720_2.00
Zea mays
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$DREB1A_02
0.719
0.816
For this family, TFs with SR scores >
0.677
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Sb02g030310.1
AP2
64
116
PVYRGVRRRGAAGRWVCEVRVPGKRGARLWLGTYLAAESAARAHDAAMLALGR
Links
Other
AP2
family TFs
Other
Sorghum bicolor
TFs
22 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AB06986.1
Alternaria brassicicola
AB06986.1
I
ARB_01992
Arthroderma benhamiae
ARB_01992
I
MCYG_00576
Arthroderma otae
MCYG_00576
I
COCC4DRAFT_55544
Bipolaris maydis
COCC4DRAFT_55544
I
COCMIDRAFT_81911
Bipolaris oryzae
COCMIDRAFT_81911
I
COCSADRAFT_21477
Bipolaris sorokiniana
COCSADRAFT_21477
I
COCVIDRAFT_21164
Bipolaris victoriae
COCVIDRAFT_21164
I
COCCADRAFT_21675
Bipolaris zeicola
COCCADRAFT_21675
I
BDDG_07136
Blastomyces dermatitidis
BDDG_07136
I
CIMG_05854
Coccidioides immitis
CIMG_05854
I
CPC735_024740
Coccidioides posadasii
CPC735_024740
I
estExt_fgenesh1_pg.C_20199
Cochliobolus heterostrophus C5
estExt_fgenesh1_pg.C_20199
I
HCBG_05620
Histoplasma capsulatum
HCBG_05620
D
LEMA_P039610.1
Leptosphaeria maculans
LEMA_P039610.1
I
MPH_04742
Macrophomina phaseolina
MPH_04742
I
MGG_02962
Magnaporthe oryzae
MGG_02962
N
MCYG_00576
Microsporum canis
MCYG_00576
I
MGYG_01386
Microsporum gypseum
MGYG_01386
I
synt_with_mycgr.1__94
Mycosphaerella fijiensis
synt_with_mycgr.1__94
I
UCRNP2_2338
Neofusicoccum parvum
UCRNP2_2338
I
PABG_06482
Paracoccidioides brasiliensis
PABG_06482
I
Pc22g23650
Penicillium chrysogenum
Pc22g23650
I
PDIP_61980
Penicillium digitatum
PDIP_61980
I
PEX1_027650
Penicillium expansum
PEX1_027650
I
PITC_053720
Penicillium italicum
PITC_053720
I
U727_00433250161
Penicillium solitum
U727_00433250161
I
SNOG_07682
Phaeosphaeria nodorum
SNOG_07682
I
MYCFIDRAFT_89500
Pseudocercospora fijiensis
MYCFIDRAFT_89500
I
PTT_12674
Pyrenophora teres
PTT_12674
I
PTRG_05347
Pyrenophora triticirepentis
PTRG_05347
I
SETTUDRAFT_102178
Setosphaeria turcica
SETTUDRAFT_102178
I
SEPMUDRAFT_146422
Sphaerulina musiva
SEPMUDRAFT_146422
I
SNOG_07682
Stagonospora nodorum
SNOG_07682
I
TEQG_05447
Trichophyton equinum
TEQG_05447
I
H101_06341
Trichophyton interdigitale
H101_06341
I
H102_07503
Trichophyton rubrum
H102_07503
I
H105_07531
Trichophyton soudanense
H105_07531
I
TESG_05799
Trichophyton tonsurans
TESG_05799
I
GSTUM_00012177001
Tuber melanosporum
GSTUM_00012177001
I