CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Si037209m.g
(
Setaria italica
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
Si037209m.g
T005379_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Si037209m
AP2
82
133
VRFRGVRRRAWGRWAAEIRDPHGSRRIWLGTFNSAEEAAAAYDVANIRFRGA
Links
Other
AP2
family TFs
Other
Setaria italica
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BRADI2G25050
Brachypodium distachyon
BRADI2G25050
N
BRADI2G57200
Brachypodium distachyon
BRADI2G57200
N
evm.TU.supercontig_21.63
Carica papaya
evm.TU.supercontig_21.63
I
Ca_15055
Cicer arietinum
Ca_15055
I
GLYMA11G01700
Glycine max
GLYMA11G01700
I
LPERR01G34250
Leersia perrieri
LPERR01G34250
N
LPERR05G13420
Leersia perrieri
LPERR05G13420
N
cassava8476.m1
Manihot esculenta
cassava8476.m1
I
MTR_5g008790
Medicago truncatula
MTR_5g008790
I
GSMUA_Achr10G04450_001
Musa acuminata
GSMUA_Achr10G04450_001
N
GSMUA_Achr3G21790_001
Musa acuminata
GSMUA_Achr3G21790_001
N
OB01G48490
Oryza brachyantha
OB01G48490
N
ORGLA05G0145800
Oryza glaberrima
ORGLA05G0145800
N
OGLUM01G43950
Oryza glumaepatula
OGLUM01G43950
N
BGIOSGA004939
Oryza indica
BGIOSGA004939
N
BGIOSGA018034
Oryza indica
BGIOSGA018034
N
OMERI05G14660
Oryza meridionalis
OMERI05G14660
N
ONIVA01G44590
Oryza nivara
ONIVA01G44590
N
ONIVA05G17560
Oryza nivara
ONIVA05G17560
N
OPUNC05G14870
Oryza punctata
OPUNC05G14870
N
ORUFI01G43070
Oryza rufipogon
ORUFI01G43070
N
OS01G0885900
Oryza sativa
OS01G0885900
N
OS05G0420300
Oryza sativa
OS05G0420300
N
Pavir.J06813
Panicum virgatum
Pavir.J06813
N
29938.m000611
Ricinus communis
29938.m000611
I
Sb03g042060
Sorghum bicolor
Sb03g042060
N
TRAES3BF106000020CFD_g
Triticum aestivum
TRAES3BF106000020CFD_g
N
GRMZM2G307152
Zea mays
GRMZM2G307152
N