Solyc06g065820.2 (Solanum lycopersicum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 Solyc06g065820.2 T005482_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF003
M06667_2.00 		Arabidopsis thaliana
DYCDCCRCCGYMDHHDYHN
NDRHDDHKRCGGYGGHGRH		 Dap-seq
OMalley et al.(2016)
ESE3_col_a 		0.857 0.980
ERF003
M06668_2.00 		Arabidopsis thaliana
HDYCKCCGCCGYHDH
DHDRCGGCGGMGRHD		 Dap-seq
OMalley et al.(2016)
ESE3_colamp_a 		0.857 0.980
WIN1
M01603_2.00 		Arabidopsis thaliana
VCRCCGCNNN
NNNGCGGYGB		 PBM
Weirauch et al.(2014)
pTH7566 		0.727 0.824
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Solyc06g065820.2.1 AP2 6 57

Links

Other AP2 family TFs
Other Solanum lycopersicum TFs

298 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
DICVIV_08944 Dictyocaulus viviparus DICVIV_08944 N 0.000
LACBIDRAFT_314470 Laccaria bicolor LACBIDRAFT_314470 N 0.000
cassava28055.m1 Manihot esculenta cassava28055.m1 N 0.000
PXEA_0001663701 Protopolystoma xenopodis PXEA_0001663701 N 0.000