Cucsa.310360 (Cucumis sativus)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Cucsa.310360 T007091_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SHN2
M06660_2.00 		Arabidopsis thaliana
DCCDCCRCCDCCDCCRCCRCY
RGYGGYGGHGGHGGYGGHGGH		 Dap-seq
OMalley et al.(2016)
SHN3_col_a 		0.711 0.941
ERF003
M06667_2.00 		Arabidopsis thaliana
DYCDCCRCCGYMDHHDYHN
NDRHDDHKRCGGYGGHGRH		 Dap-seq
OMalley et al.(2016)
ESE3_col_a 		0.688 0.804
ERF003
M06668_2.00 		Arabidopsis thaliana
HDYCKCCGCCGYHDH
DHDRCGGCGGMGRHD		 Dap-seq
OMalley et al.(2016)
ESE3_colamp_a 		0.688 0.804
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.310360.1 AP2 5 56
Cucsa.310360.2 AP2 1 30

Links

Other AP2 family TFs
Other Cucumis sativus TFs

305 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000004221 Ailuropoda melanoleuca ENSAMEG00000004221 N 0.000
ENSAPLG00000008031 Anas platyrhynchos ENSAPLG00000008031 I 0.000
Afo_R002493 Aptenodytes forsteri Afo_R002493 I 0.000
ENSAMXG00000008068 Astyanax mexicanus ENSAMXG00000008068 N 0.000
ENSP00000341243-D1 Bos grunniens ENSP00000341243-D1 I 0.000
Brh_R003150 Buceros rhinoceros Brh_R003150 N 0.000
Aan_R003297 Calypte anna Aan_R003297 N 0.000
RBPJL Canis familiaris ENSCAFG00000009670 I 0.000
RBPJL Cavia porcellus ENSCPOG00000020407 I 0.000
Cmyd_10015219 Chelonia mydas Cmyd_10015219 I 0.000
ENSCSAG00000014350 Chlorocebus sabaeus ENSCSAG00000014350 I 0.000
ENSCHOG00000000749 Choloepus hoffmanni ENSCHOG00000000749 I 0.000
rbpjl Danio rerio ENSDARG00000074148 N 0.000
RBPJL Dasypus novemcinctus ENSDNOG00000011919 I 0.000
RBPJL Echinops telfairi ENSETEG00000005066 I 0.000
RBPJL Equus caballus ENSECAG00000013463 I 0.000
RBPJL Felis catus ENSFCAG00000009812 I 0.000
RBPJL Gallus gallus ENSGALG00000003952 I 0.000
Gfo_R005402 Geospiza fortis Gfo_R005402 I 0.000
ENSLOCG00000007645 Lepisosteus oculatus ENSLOCG00000007645 N 0.000
RBPJL Loxodonta africana ENSLAFG00000008148 I 0.000
ENSP00000341243 Macaca fascicularis ENSP00000341243 I 0.000
RBPJL Macaca mulatta ENSMMUG00000003404 I 0.000
RBPJL Meleagris gallopavo ENSMGAG00000017264 I 0.000
RBPJL Microcebus murinus ENSMICG00000014225 I 0.000
RBPJL Monodelphis domestica ENSMODG00000016187 I 0.000
ENSMPUG00000017637 Mustela putorius furo ENSMPUG00000017637 I 0.000
Rbpjl Mus musculus ENSMUSG00000017007 D 0.000
Myotis_brandtii_RBPJL_10002478 Myotis brandtii Myotis_brandtii_RBPJL_10002478 I 0.000
RBPJL Myotis lucifugus ENSMLUG00000005893 I 0.000
SNAPOd2T00012852001 Oikopleura dioica SNAPOd2T00012852001 N 0.000
Ogr10601 Ophisaurus gracilis Ogr10601 I 0.000
RBPJL Oryctolagus cuniculus ENSOCUG00000009087 I 0.000
RBPJL Otolemur garnettii ENSOGAG00000024900 I 0.000
RBPJL Pan troglodytes ENSPTRG00000013542 I 0.000
ENSPSIG00000014017 Pelodiscus sinensis ENSPSIG00000014017 I 0.000
Pvit_08747 Pogona vitticeps Pvit_08747 I 0.000
RBPJL Pteropus vampyrus ENSPVAG00000008751 I 0.000
Rbpjl Rattus norvegicus ENSRNOG00000026295 I 0.000
ENSSHAG00000013207 Sarcophilus harrisii ENSSHAG00000013207 I 0.000
RBPJL Taeniopygia guttata ENSTGUG00000005009 I 0.000
RBPJL Tursiops truncatus ENSTTRG00000013806 I 0.000