gw1.14.214.1 (Physcomitrella patens)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 gw1.14.214.1 T007263_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
gw1.8.141.1
M01642_2.00 		Physcomitrella patens
CACCGACM
KGTCGGTG		 PBM
Weirauch et al.(2014)
pTH8456 		0.736 0.958
estExt_gwp_gw1.C_550163
M01640_2.00 		Physcomitrella patens
NCACCGACHN
NDGTCGGTGN		 PBM
Weirauch et al.(2014)
pTH8472 		0.723 0.875
Q8LKX0_MAIZE
M09722_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DBF2_01 		0.695 0.771
estExt_fgenesh1_pg.C_4800009
M01639_2.00 		Physcomitrella patens
MACCGACM
KGTCGGTK		 PBM
Weirauch et al.(2014)
pTH8488 		0.681 0.854
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
gw1.14.214.1 AP2 1 50

Links

Other AP2 family TFs
Other Physcomitrella patens TFs

66 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACRE_005470 Acremonium chrysogenum ACRE_005470 I 0.000
BAUCODRAFT_276951 Baudoinia compniacensis BAUCODRAFT_276951 N 0.000
BDDG_03512 Blastomyces dermatitidis BDDG_03512 I 0.000
A1O1_04210 Capronia coronata A1O1_04210 I 0.000
A1O3_01208 Capronia epimyces A1O3_01208 I 0.000
PV04_02419 Capronia semiimmersa PV04_02419 I 0.000
CHGG_10488 Chaetomium globosum CHGG_10488 N 0.000
Z519_11346 Cladophialophora bantiana Z519_11346 I 0.000
G647_08748 Cladophialophora carrionii G647_08748 I 0.000
PV07_02787 Cladophialophora immunda PV07_02787 I 0.000
A1O7_02237 Cladophialophora yegresii A1O7_02237 I 0.000
W97_09232 Coniosporium apollinis W97_09232 N 0.000
CCM_08924 Cordyceps militaris CCM_08924 N 0.000
HMPREF1541_00486 Cyphellophora europaea HMPREF1541_00486 I 0.000
DOTSEDRAFT_69470 Dothistroma septosporum DOTSEDRAFT_69470 N 0.000
HMPREF1120_08360 Exophiala dermatitidis HMPREF1120_08360 I 0.000
FOMPIDRAFT_73073 Fomitopsis pinicola FOMPIDRAFT_73073 N 0.000
Z517_00401 Fonsecaea pedrosoi Z517_00401 I 0.000
HCBG_01276 Histoplasma capsulatum HCBG_01276 I 0.000
fgeneshMC_pg.5_#_674 Mucor circinelloides fgeneshMC_pg.5_#_674 I 0.000
fgeneshMC_pg.1_#_1636 Mucor circinelloides fgeneshMC_pg.1_#_1636 I 0.000
estExt_fgeneshMC_kg.C_70068 Mucor circinelloides estExt_fgeneshMC_kg.C_70068 N 0.000
MYCTH_2316740 Myceliophthora thermophila MYCTH_2316740 N 0.000
estExt_fgenesh1_pg.C_160018 Mycosphaerella fijiensis estExt_fgenesh1_pg.C_160018 N 0.000
PABG_06099 Paracoccidioides brasiliensis PABG_06099 I 0.000
PAAG_12580 Paracoccidioides sp lutzii PAAG_12580 I 0.000
MYCFIDRAFT_150893 Pseudocercospora fijiensis MYCFIDRAFT_150893 N 0.000
Z518_01931 Rhinocladiella mackenziei Z518_01931 I 0.000
RO3G_03650 Rhizopus oryzae RO3G_03650 N 0.000
SEPMUDRAFT_146995 Sphaerulina musiva SEPMUDRAFT_146995 N 0.000
VHEMI01778 Torrubiella hemipterigena VHEMI01778 N 0.000