CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Eucgr.I00564
(
Eucalyptus grandis
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00847 (AP2)
IPR001471
Eucgr.I00564
T008214_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AIL7
M06688_2.00
Arabidopsis thaliana
CRNWTHYCRAG
CTYGRDAWNYG
Dap-seq
OMalley et al.(2016)
AIL7_col_a
0.854
0.875
AIL7
M06689_2.00
Arabidopsis thaliana
DCRNWTHYCRAG
CTYGRDAWNYGH
Dap-seq
OMalley et al.(2016)
AIL7_colamp_a
0.854
0.875
PLT1
M06622_2.00
Arabidopsis thaliana
DDCACGNWWHYCRAGRHNN
NNDYCTYGRDWWNCGTGHH
Dap-seq
OMalley et al.(2016)
PLT1_col_a
0.852
0.856
PLT1
M06623_2.00
Arabidopsis thaliana
DYDCRNWTYYCRAG
CTYGRRAWNYGHRH
Dap-seq
OMalley et al.(2016)
PLT1_colamp_a
0.852
0.856
ANT
M02647_2.00
Arabidopsis thaliana
DNRCACRNWTCCCVADGYNHW
WDNRCHTBGGGAWNYGTGYNH
SELEX
Mathelier et al.(2014)
MA0571.1
0.816
0.827
ANT
M09705_2.00
Arabidopsis thaliana
CACRNWTCCCRAKG
CMTYGGGAWNYGTG
Transfac
Matys et al.(2006)
P$ANT_01
0.816
0.827
Q6SA75_TOBAC
M09733_2.00
Nicotiana tabacum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ANTL_01
0.815
0.817
Q6SA75_TOBAC
M09734_2.00
Nicotiana tabacum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ANTL_02
0.815
0.817
For this family, TFs with SR scores >
0.677
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Eucgr.I00564.1
AP2
221
278
SIYRGVTRHRWTGRYEAHLWDNSCRREGQARKGRQGGYDKEDKAARAYDLAALKYWGP
Eucgr.I00564.1
AP2
320
372
SIYRGVTRHHQQGRWQARIGRVAGNKDLYLGTFATEEEAAEAYDIAAIKFRGL
Links
Other
AP2
family TFs
Other
Eucalyptus grandis
TFs
525 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
nAv.1.0.1.g00032
Acanthocheilonema viteae
nAv.1.0.1.g00032
I
ACYPI004663
Acyrthosiphon pisum
ACYPI004663
I
AAEL004381
Aedes aegypti
AAEL004381
I
AAEL011161
Aedes aegypti
AAEL011161
I
ENSAMEG00000002574
Ailuropoda melanoleuca
ENSAMEG00000002574
I
Alligator_sinensis_CCG005631.1
Alligator sinensis
Alligator_sinensis_CCG005631.1
I
Alligator_sinensis_CCG019960.1
Alligator sinensis
Alligator_sinensis_CCG019960.1
I
ENSAPLG00000005336
Anas platyrhynchos
ENSAPLG00000005336
I
ANCCAN_00149
Ancylostoma caninum
ANCCAN_00149
I
ANCCEY_04123
Ancylostoma ceylanicum
ANCCEY_04123
I
ANCDUO_05529
Ancylostoma duodenale
ANCDUO_05529
I
ASIM_0000334601
Anisakis simplex
ASIM_0000334601
I
BBX
Anolis carolinensis
ENSACAG00000006532
I
AALB003439
Anopheles albimanus
AALB003439
I
AARA001217
Anopheles arabiensis
AARA001217
I
AARA009897
Anopheles arabiensis
AARA009897
I
ACHR004909
Anopheles christyi
ACHR004909
I
ACHR006446
Anopheles christyi
ACHR006446
I
ACOM034716
Anopheles coluzzii
ACOM034716
I
ACUA015009
Anopheles culicifacies
ACUA015009
I
ADAC008993
Anopheles darlingi
ADAC008993
I
ADAC009062
Anopheles darlingi
ADAC009062
I
ADIR003322
Anopheles dirus
ADIR003322
I
ADIR003385
Anopheles dirus
ADIR003385
I
AEPI004245
Anopheles epiroticus
AEPI004245
I
AEPI005675
Anopheles epiroticus
AEPI005675
I
AFAF009600
Anopheles farauti
AFAF009600
I
AFAF016820
Anopheles farauti
AFAF016820
I
AFUN003674
Anopheles funestus
AFUN003674
I
AFUN006011
Anopheles funestus
AFUN006011
I
AGAP003896
Anopheles gambiae
AGAP003896
I
AGAP003897
Anopheles gambiae
AGAP003897
I
AGAP013411
Anopheles gambiae
AGAP013411
I
AMAM016153
Anopheles maculatus
AMAM016153
I
AMAM017484
Anopheles maculatus
AMAM017484
I
AMEC010127
Anopheles melas
AMEC010127
I
AMEM005678
Anopheles merus
AMEM005678
I
AMIN000258
Anopheles minimus
AMIN000258
I
AMIN003810
Anopheles minimus
AMIN003810
I
AQUA002577
Anopheles quadriannulatus
AQUA002577
I
AQUA008168
Anopheles quadriannulatus
AQUA008168
I
ASTEI00261
Anopheles stephensi
ASTEI00261
I
ASTEI00827
Anopheles stephensi
ASTEI00827
I
ASTEI11145
Anopheles stephensi
ASTEI11145
I
GB43462
Apis mellifera
GB43462
I
GB48450
Apis mellifera
GB48450
I
Afo_R006638
Aptenodytes forsteri
Afo_R006638
I
ASU_10300
Ascaris suum
ASU_10300
I
ENSAMXG00000014362
Astyanax mexicanus
ENSAMXG00000014362
I
ENSAMXG00000017656
Astyanax mexicanus
ENSAMXG00000017656
I
ENSAMXG00000018358
Astyanax mexicanus
ENSAMXG00000018358
I
ACEP13490
Atta cephalotes
ACEP13490
I
ACEP18843
Atta cephalotes
ACEP18843
I
BGLB001462
Biomphalaria glabrata
BGLB001462
I
BGLB009093
Biomphalaria glabrata
BGLB009093
I
BGIBMGA008274
Bombyx mori
BGIBMGA008274
I
BGIBMGA010263
Bombyx mori
BGIBMGA010263
I
ENSBTAP00000009058-D1
Bos grunniens
ENSBTAP00000009058-D1
I
ENSP00000160740-D1
Bos grunniens
ENSP00000160740-D1
I
BBX
Bos taurus
ENSBTAG00000006893
I
ENSBTAG00000019785
Bos taurus
ENSBTAG00000019785
I
gw.448.64.1
Branchiostoma floridae
gw.448.64.1
I
gw.46.292.1
Branchiostoma floridae
gw.46.292.1
I
Bm5934
Brugia malayi
Bm5934
I
Brh_R008020
Buceros rhinoceros
Brh_R008020
I
CBN17413
Caenorhabditis brenneri
CBN17413
I
gei-3
Caenorhabditis elegans
WBGene00001560
D
CJA07419
Caenorhabditis japonica
CJA07419
I
CRE24068
Caenorhabditis remanei
CRE24068
I
BBX
Callithrix jacchus
ENSCJAG00000004843
I
CIC
Callithrix jacchus
ENSCJAG00000012847
I
Aan_R014485
Calypte anna
Aan_R014485
I
Cflo_01544--XP_624175.2_APIME
Camponotus floridanus
Cflo_01544--XP_624175.2_APIME
I
Cflo_04908--XP_624175.2_APIME
Camponotus floridanus
Cflo_04908--XP_624175.2_APIME
I
CIC
Canis familiaris
ENSCAFG00000004858
I
BBX
Canis familiaris
ENSCAFG00000009867
I
CapteG223458
Capitella teleta
CapteG223458
I
CapteG39110
Capitella teleta
CapteG39110
I
CapteG39126
Capitella teleta
CapteG39126
I
BBX
Cavia porcellus
ENSCPOG00000003575
I
ENSCPOG00000004391
Cavia porcellus
ENSCPOG00000004391
I
Cmyd_10001800
Chelonia mydas
Cmyd_10001800
I
Cmyd_10015225
Chelonia mydas
Cmyd_10015225
I
ENSCSAG00000006313
Chlorocebus sabaeus
ENSCSAG00000006313
I
CLEC003268
Cimex lectularius
CLEC003268
I
ENSCING00000007655
Ciona intestinalis
ENSCING00000007655
I
CGI_10015746
Crassostrea gigas
CGI_10015746
I
CGI_10018417
Crassostrea gigas
CGI_10018417
I
CpipJ_CPIJ005582
Culex pipiens
CpipJ_CPIJ005582
I
CpipJ_CPIJ012202
Culex pipiens
CpipJ_CPIJ012202
I
CPIJ005582
Culex quinquefasciatus
CPIJ005582
I
CPIJ012202
Culex quinquefasciatus
CPIJ012202
I
KGM_16790
Danaus plexippus
KGM_16790
I
KGM_16941
Danaus plexippus
KGM_16941
I
bbx
Danio rerio
ENSDARG00000012699
I
cica
Danio rerio
ENSDARG00000071150
I
BBX
Dasypus novemcinctus
ENSDNOG00000013923
I
CIC
Dasypus novemcinctus
ENSDNOG00000047657
I
YQE_03282
Dendroctonus ponderosae
YQE_03282
I
YQE_06837
Dendroctonus ponderosae
YQE_06837
I
Bbx
Dipodomys ordii
ENSDORG00000008169
I
Cic
Dipodomys ordii
ENSDORG00000008822
I
nDi.2.2.2.g01012
Dirofilaria immitis
nDi.2.2.2.g01012
I
GF17645
Drosophila ananassae
FBgn0094663
I
GF20922
Drosophila ananassae
FBgn0097927
I
GG19727
Drosophila erecta
FBgn0111928
I
GG23823
Drosophila erecta
FBgn0115962
I
GH23608
Drosophila grimshawi
FBgn0131065
I
bbx
Drosophila melanogaster
FBgn0024251
D
cic
Drosophila melanogaster
FBgn0262582
D
GI21541
Drosophila mojavensis
FBgn0144271
I
GI22721
Drosophila mojavensis
FBgn0145448
I
GL12097
Drosophila persimilis
FBgn0149705
I
GL20955
Drosophila persimilis
FBgn0158550
I
GA16961
Drosophila pseudoobscura
FBgn0076975
I
GA30228
Drosophila pseudoobscura
FBgn0263363
I
GM23082
Drosophila sechellia
FBgn0177950
I
GM23104
Drosophila sechellia
FBgn0177972
I
GD19345
Drosophila simulans
FBgn0190847
I
GJ16014
Drosophila virilis
FBgn0203199
I
GJ23448
Drosophila virilis
FBgn0210547
I
GK10919
Drosophila willistoni
FBgn0212930
I
GK25081
Drosophila willistoni
FBgn0227040
I
GE17925
Drosophila yakuba
FBgn0235361
I
GE25659
Drosophila yakuba
FBgn0242721
I
BBX
Echinops telfairi
ENSETEG00000005122
I
CIC
Echinops telfairi
ENSETEG00000017271
I
EVEC_0000011601
Enterobius vermicularis
EVEC_0000011601
I
CIC
Equus caballus
ENSECAG00000011342
I
BBX
Equus caballus
ENSECAG00000023413
I
BBX
Erinaceus europaeus
ENSEEUG00000014092
I
BBX
Felis catus
ENSFCAG00000007296
I
ENSFCAG00000012737
Felis catus
ENSFCAG00000012737
I
ENSFALG00000006478
Ficedula albicollis
ENSFALG00000006478
I
ENSGMOG00000005167
Gadus morhua
ENSGMOG00000005167
I
ENSGMOG00000015829
Gadus morhua
ENSGMOG00000015829
I
cicb
Gasterosteus aculeatus
ENSGACG00000009452
I
bbx
Gasterosteus aculeatus
ENSGACG00000020111
I
Gfo_R002593
Geospiza fortis
Gfo_R002593
I
CIC
Gorilla gorilla
ENSGGOG00000000192
I
BBX
Gorilla gorilla
ENSGGOG00000028441
I
HHAL000065-PA
Halyomorpha halys
HHAL000065-PA
I
Hsal_01854--XP_624175.2_APIME
Harpegnathos saltator
Hsal_01854--XP_624175.2_APIME
I
Hsal_08911--XP_624175.2_APIME
Harpegnathos saltator
Hsal_08911--XP_624175.2_APIME
I
HMEL012996
Heliconius melpomene
HMEL012996
I
Hba_18941
Heterorhabditis bacteriophora
Hba_18941
I
CIC
Homo sapiens
ENSG00000079432
I
BBX
Homo sapiens
ENSG00000114439
D
ENSSTOG00000000852
Ictidomys tridecemlineatus
ENSSTOG00000000852
I
ISCW010061
Ixodes scapularis
ISCW010061
I
ENSLACG00000001134
Latimeria chalumnae
ENSLACG00000001134
I
ENSLACG00000002764
Latimeria chalumnae
ENSLACG00000002764
I
ENSLOCG00000005165
Lepisosteus oculatus
ENSLOCG00000005165
I
LDEC000948
Leptinotarsa decemlineata
LDEC000948
I
nLs.2.1.2.g07996
Litomosoides sigmodontis
nLs.2.1.2.g07996
I
LOAG_17202
Loa loa
LOAG_17202
I
LotgiG100217
Lottia gigantea
LotgiG100217
I
LotgiG89909
Lottia gigantea
LotgiG89909
I
BBX
Loxodonta africana
ENSLAFG00000006362
I
LCUP006498
Lucilia cuprina
LCUP006498
I
LCUP009387
Lucilia cuprina
LCUP009387
I
LLOJ007756
Lutzomyia longipalpis
LLOJ007756
I
ENSMMUP00000011518
Macaca fascicularis
ENSMMUP00000011518
I
ENSP00000160740
Macaca fascicularis
ENSP00000160740
I
BBX
Macaca mulatta
ENSMMUG00000008787
I
ENSMMUG00000012174
Macaca mulatta
ENSMMUG00000012174
I
ENSMEUG00000016625
Macropus eugenii
ENSMEUG00000016625
I
BBX
Meleagris gallopavo
ENSMGAG00000014384
I
MCINX015089
Melitaea cinxia
MCINX015089
I
ENSMICG00000015176
Microcebus murinus
ENSMICG00000015176
I
BBX
Monodelphis domestica
ENSMODG00000001748
I
MDOA004531
Musca domestica
MDOA004531
I
MDOA012813
Musca domestica
MDOA012813
I
ENSMPUG00000007557
Mustela putorius furo
ENSMPUG00000007557
I
ENSMPUG00000009907
Mustela putorius furo
ENSMPUG00000009907
I
Cic
Mus musculus
ENSMUSG00000005442
D
Bbx
Mus musculus
ENSMUSG00000022641
D
Myotis_brandtii_BBX_10016000
Myotis brandtii
Myotis_brandtii_BBX_10016000
I
Myotis_brandtii_Cic_10007129
Myotis brandtii
Myotis_brandtii_Cic_10007129
I
BBX
Myotis lucifugus
ENSMLUG00000007351
I
ENSMLUG00000016650
Myotis lucifugus
ENSMLUG00000016650
I
NV10910
Nasonia vitripennis
NV10910
I
ENSNLEG00000003524
Nomascus leucogenys
ENSNLEG00000003524
I
ENSNLEG00000010614
Nomascus leucogenys
ENSNLEG00000010614
I
BBX
Ochotona princeps
ENSOPRG00000017013
I
Ocbimv22001036m.g
Octopus bimaculoides
Ocbimv22001036m.g
I
Ocbimv22037932m.g
Octopus bimaculoides
Ocbimv22037932m.g
I
OESDEN_00065
Oesophagostomum dentatum
OESDEN_00065
I
OFLC_0001331401
Onchocerca flexuosa
OFLC_0001331401
I
nOo.2.0.1.g00287
Onchocerca ochengi
nOo.2.0.1.g00287
I
WBGene00241539
Onchocerca volvulus
WBGene00241539
I
Ogr10275
Ophisaurus gracilis
Ogr10275
I
Ogr11041
Ophisaurus gracilis
Ogr11041
I
ENSONIG00000004775
Oreochromis niloticus
ENSONIG00000004775
I
ENSONIG00000004979
Oreochromis niloticus
ENSONIG00000004979
I
ENSONIG00000013108
Oreochromis niloticus
ENSONIG00000013108
I
BBX
Ornithorhynchus anatinus
ENSOANG00000007497
I
BBX
Oryctolagus cuniculus
ENSOCUG00000001686
I
ENSOCUG00000006458
Oryctolagus cuniculus
ENSOCUG00000006458
I
bbx
Oryzias latipes
ENSORLG00000005486
I
cica
Oryzias latipes
ENSORLG00000007091
I
cicb
Oryzias latipes
ENSORLG00000013259
I
CIC
Otolemur garnettii
ENSOGAG00000003964
I
BBX
Otolemur garnettii
ENSOGAG00000008056
I
ENSOARG00000007985
Ovis aries
ENSOARG00000007985
I
ENSOARG00000018829
Ovis aries
ENSOARG00000018829
I
CIC
Pan troglodytes
ENSPTRG00000011051
I
BBX
Pan troglodytes
ENSPTRG00000015187
I
ENSPANG00000009039
Papio anubis
ENSPANG00000009039
I
ENSPANG00000018335
Papio anubis
ENSPANG00000018335
I
PHUM079880
Pediculus humanus
PHUM079880
I
PHUM230960
Pediculus humanus
PHUM230960
I
ENSPSIG00000015872
Pelodiscus sinensis
ENSPSIG00000015872
I
ENSPFOG00000000116
Poecilia formosa
ENSPFOG00000000116
I
ENSPFOG00000000813
Poecilia formosa
ENSPFOG00000000813
I
ENSPFOG00000016231
Poecilia formosa
ENSPFOG00000016231
I
Pvit_02469
Pogona vitticeps
Pvit_02469
I
Pvit_02876
Pogona vitticeps
Pvit_02876
I
ENSPPYG00000010041
Pongo abelii
ENSPPYG00000010041
I
ENSPPYG00000013578
Pongo abelii
ENSPPYG00000013578
I
POSPLDRAFT_104619
Postia placenta
POSPLDRAFT_104619
I
POSPLDRAFT_98507
Postia placenta
POSPLDRAFT_98507
I
BBX
Procavia capensis
ENSPCAG00000013443
I
CIC
Procavia capensis
ENSPCAG00000017001
I
BBX
Pteropus vampyrus
ENSPVAG00000010534
I
CIC
Pteropus vampyrus
ENSPVAG00000016806
I
Bbx
Rattus norvegicus
ENSRNOG00000001971
I
Cic
Rattus norvegicus
ENSRNOG00000056118
I
RPRC001090
Rhodnius prolixus
RPRC001090
I
Sakowv30039572m.g
Saccoglossus kowalevskii
Sakowv30039572m.g
I
Sakowv30042695m.g
Saccoglossus kowalevskii
Sakowv30042695m.g
I
ENSSHAG00000003009
Sarcophilus harrisii
ENSSHAG00000003009
I
SCUD_0001673101
Schistosoma curassoni
SCUD_0001673101
I
B_00914
Schistosoma haematobium
B_00914
I
Sjc_0093980
Schistosoma japonicum
Sjc_0093980
I
Smp_142600
Schistosoma mansoni
Smp_142600
I
SMU15002098
Schmidtea mediterranea
SMU15002098
I
SBAD_0000026401
Soboliphyme baturini
SBAD_0000026401
I
SINV12425
Solenopsis invicta
SINV12425
I
L596_g5739
Steinernema carpocapsae
L596_g5739
I
L889_g11174
Steinernema feltiae
L889_g11174
I
L893_g26751
Steinernema glaseri
L893_g26751
I
L898_g8837
Steinernema monticolum
L898_g8837
I
L892_g3879
Steinernema scapterisci
L892_g3879
I
SMAR009315
Strigamia maritima
SMAR009315
I
SMAR012744
Strigamia maritima
SMAR012744
I
SPU_025292
Strongylocentrotus purpuratus
SPU_025292
I
SVUK_0000932601
Strongylus vulgaris
SVUK_0000932601
I
CIC
Sus scrofa
ENSSSCG00000003030
I
BBX
Sus scrofa
ENSSSCG00000011943
I
ENSSSCG00000025539
Sus scrofa
ENSSSCG00000025539
I
SMUV_0001072601
Syphacia muris
SMUV_0001072601
I
ENSTGUG00000013611
Taeniopygia guttata
ENSTGUG00000013611
I
bbx
Takifugu rubripes
ENSTRUG00000003077
I
CIC
Takifugu rubripes
ENSTRUG00000007193
I
ENSTSYG00000000857
Tarsius syrichta
ENSTSYG00000000857
I
tetur21g00740
Tetranychus urticae
tetur21g00740
I
tetur23g01950
Tetranychus urticae
tetur23g01950
I
CIC
Tetraodon nigroviridis
ENSTNIG00000003521
I
bbx
Tetraodon nigroviridis
ENSTNIG00000008596
I
TCLT_0000608401
Thelazia callipaeda
TCLT_0000608401
I
TC004697
Tribolium castaneum
TC004697
I
TC007499
Tribolium castaneum
TC007499
I
D917_02434
Trichinella nativa
D917_02434
I
TMUE_s0223001200
Trichuris muris
TMUE_s0223001200
I
D918_06270
Trichuris suis
D918_06270
I
TTRE_0000098801
Trichuris trichiura
TTRE_0000098801
I
CIC
Tupaia belangeri
ENSTBEG00000009044
I
BBX
Tursiops truncatus
ENSTTRG00000013182
I
CIC
Tursiops truncatus
ENSTTRG00000013873
I
Tal_R013114
Tyto alba
Tal_R013114
I
BBX
Vicugna pacos
ENSVPAG00000007818
I
WUBG_04884
Wuchereria bancrofti
WUBG_04884
I
bbx.L
Xenopus laevis
XB-GENE-981431
I
cic
Xenopus tropicalis
XB-GENE-6467430
I
XP_002932333
Xenopus tropicalis
XP_002932333
I
ENSXMAG00000009457
Xiphophorus maculatus
ENSXMAG00000009457
I
L798_02329
Zootermopsis nevadensis
L798_02329
I
L798_08623
Zootermopsis nevadensis
L798_08623
I