gene26182-v1.0-hybrid (Fragaria vesca)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 gene26182-v1.0-hybrid T008434_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
mrna26182.1-v1.0-hybrid AP2 40 91

Links

Other AP2 family TFs
Other Fragaria vesca TFs

68 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00069p00132820 Amborella trichopoda AMTR_s00069p00132820 I 0.703
AMTR_s00006p00266920 Amborella trichopoda AMTR_s00006p00266920 I 0.738
Aquca_026_00181 Aquilegia coerulea Aquca_026_00181 I 0.705
PK28640.1 Cannabis sativa PK28640.1 I 0.707
PK25269.1 Cannabis sativa PK25269.1 I 0.689
evm.TU.supercontig_18.194 Carica papaya evm.TU.supercontig_18.194 I 0.695
evm.TU.supercontig_62.63 Carica papaya evm.TU.supercontig_62.63 I 0.692
Ca_16397 Cicer arietinum Ca_16397 I 0.700
Ca_25424 Cicer arietinum Ca_25424 I 0.715
Ciclev10022187m.g Citrus clementina Ciclev10022187m.g N 0.702
Ciclev10023360m.g Citrus clementina Ciclev10023360m.g I 0.689
Ciclev10023764m.g Citrus clementina Ciclev10023764m.g I 0.697
orange1.1g037119m.g Citrus sinensis orange1.1g037119m.g I 0.697
orange1.1g016393m.g Citrus sinensis orange1.1g016393m.g I 0.689
orange1.1g042608m.g Citrus sinensis orange1.1g042608m.g N 0.702
Eucgr.B00666 Eucalyptus grandis Eucgr.B00666 I 0.681
gene16905-v1.0-hybrid Fragaria vesca gene16905-v1.0-hybrid I 0.697
GLYMA17G13320 Glycine max GLYMA17G13320 I 0.694
GLYMA03G01931 Glycine max GLYMA03G01931 I 0.700
GLYMA05G07690 Glycine max GLYMA05G07690 I 0.694
GLYMA07G08542 Glycine max GLYMA07G08542 I 0.700
Gorai.001G064900 Gossypium raimondii Gorai.001G064900 N 0.686
Gorai.008G116800 Gossypium raimondii Gorai.008G116800 I 0.697
Gorai.008G261800 Gossypium raimondii Gorai.008G261800 I 0.689
Lus10036556.g Linum usitatissimum Lus10036556.g I 0.697
Lus10041372.g Linum usitatissimum Lus10041372.g I 0.695
LjSGA_026378.1 Lotus japonicus LjSGA_026378.1 N 0.694
MDP0000197375 Malus domestica MDP0000197375 I 0.743
MDP0000157628 Malus domestica MDP0000157628 I 0.743
MDP0000138669 Malus domestica MDP0000138669 I 0.697
MDP0000133476 Malus domestica MDP0000133476 I 0.697
cassava28630.m1 Manihot esculenta cassava28630.m1 I 0.680
cassava40212.m1 Manihot esculenta cassava40212.m1 I 0.697
cassava4119.m1 Manihot esculenta cassava4119.m1 I 0.727
cassava9303.m1 Manihot esculenta cassava9303.m1 I 0.723
MTR_8g032610 Medicago truncatula MTR_8g032610 I 0.700
MTR_2g016730 Medicago truncatula MTR_2g016730 N 0.689
MTR_4g082345 Medicago truncatula MTR_4g082345 I 0.714
MTR_7g011630 Medicago truncatula MTR_7g011630 I 0.677
mgf018851m Mimulus guttatus mgf018851m I 0.697
GSMUA_Achr3G12350_001 Musa acuminata GSMUA_Achr3G12350_001 I 0.699
BGIOSGA031114 Oryza indica BGIOSGA031114 I 0.699
OMERI09G12500 Oryza meridionalis OMERI09G12500 I 0.701
ONIVA09G17920 Oryza nivara ONIVA09G17920 I 0.699
OPUNC09G15300 Oryza punctata OPUNC09G15300 I 0.701
ORUFI09G18220 Oryza rufipogon ORUFI09G18220 I 0.701
Pavir.Ba01277 Panicum virgatum Pavir.Ba01277 I 0.691
POPTR_0014s07280 Populus trichocarpa POPTR_0014s07280 I 0.697
POPTR_0008s09080 Populus trichocarpa POPTR_0008s09080 I 0.679
Pm030235 Prunus mume Pm030235 I 0.758
Pm008788 Prunus mume Pm008788 I 0.697
PRUPE_ppa018710mg Prunus persica PRUPE_ppa018710mg I 0.747
PRUPE_ppa022202mg Prunus persica PRUPE_ppa022202mg I 0.697
30174.m009031 Ricinus communis 30174.m009031 I 0.715
30174.m008961 Ricinus communis 30174.m008961 I 0.697
30068.m002623 Ricinus communis 30068.m002623 I 0.683
SapurV1A.2432s0010 Salix purpurea SapurV1A.2432s0010 I 0.697
Si032213m.g Setaria italica Si032213m.g I 0.691
Solyc03g114440.1 Solanum lycopersicum Solyc03g114440.1 N 0.689
Solyc01g091760.2 Solanum lycopersicum Solyc01g091760.2 I 0.687
PGSC0003DMG400024606 Solanum tuberosum PGSC0003DMG400024606 I 0.697
PGSC0003DMG400017051 Solanum tuberosum PGSC0003DMG400017051 I 0.687
Sb02g030350 Sorghum bicolor Sb02g030350 I 0.685
TCM_005425 Theobroma cacao TCM_005425 I 0.697
TCM_015579 Theobroma cacao TCM_015579 I 0.689
TCM_014471 Theobroma cacao TCM_014471 I 0.748
VIT_17s0000g04480 Vitis vinifera VIT_17s0000g04480 I 0.724
GRMZM2G018138 Zea mays GRMZM2G018138 I 0.685