Lus10016815.g (Linum usitatissimum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Lus10016815.g T008813_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF003
M06667_2.00 		Arabidopsis thaliana
DYCDCCRCCGYMDHHDYHN
NDRHDDHKRCGGYGGHGRH		 Dap-seq
OMalley et al.(2016)
ESE3_col_a 		0.851 0.961
ERF003
M06668_2.00 		Arabidopsis thaliana
HDYCKCCGCCGYHDH
DHDRCGGCGGMGRHD		 Dap-seq
OMalley et al.(2016)
ESE3_colamp_a 		0.851 0.961
WIN1
M01603_2.00 		Arabidopsis thaliana
VCRCCGCNNN
NNNGCGGYGB		 PBM
Weirauch et al.(2014)
pTH7566 		0.720 0.804
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10016815 AP2 6 57

Links

Other AP2 family TFs
Other Linum usitatissimum TFs

298 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AOL_s00076g415 Arthrobotrys oligospora AOL_s00076g415 I 0.000
ARB_05109 Arthroderma benhamiae ARB_05109 I 0.000
MCYG_04594 Arthroderma otae MCYG_04594 I 0.000
ACLA_057460 Aspergillus clavatus CADACLAG00005513 I 0.000
CADAFLAG00013310 Aspergillus flavus CADAFLAG00013310 I 0.000
AFUA_8G04130 Aspergillus fumigatus CADAFUAG00003064 I 0.000
ANIA_01425 Aspergillus nidulans CADANIAG00008037 D 0.000
CADANGAG00013361 Aspergillus niger CADANGAG00013361 I 0.000
CADAORAG00009957 Aspergillus oryzae CADAORAG00009957 I 0.000
EURHEDRAFT_514838 Aspergillus ruber EURHEDRAFT_514838 I 0.000
BDDG_01581 Blastomyces dermatitidis BDDG_01581 I 0.000
PVAR5_4646 Byssochlamys spectabilis PVAR5_4646 I 0.000
A1O1_03398 Capronia coronata A1O1_03398 I 0.000
A1O3_07022 Capronia epimyces A1O3_07022 I 0.000
PV04_06196 Capronia semiimmersa PV04_06196 I 0.000
Z519_07621 Cladophialophora bantiana Z519_07621 I 0.000
G647_06695 Cladophialophora carrionii G647_06695 I 0.000
PV07_04224 Cladophialophora immunda PV07_04224 I 0.000
A1O5_07806 Cladophialophora psammophila A1O5_07806 I 0.000
A1O5_09915 Cladophialophora psammophila A1O5_09915 I 0.000
A1O7_05830 Cladophialophora yegresii A1O7_05830 I 0.000
CIMG_04417 Coccidioides immitis CIMG_04417 I 0.000
CPC735_073310 Coccidioides posadasii CPC735_073310 I 0.000
HMPREF1541_01964 Cyphellophora europaea HMPREF1541_01964 I 0.000
H072_5429 Dactylellina haptotyla H072_5429 I 0.000
DRE_06459 Drechslerella stenobrocha DRE_06459 I 0.000
A1O9_03904 Exophiala aquamarina A1O9_03904 I 0.000
HMPREF1120_06957 Exophiala dermatitidis HMPREF1120_06957 I 0.000
PV06_01341 Exophiala oligosperma PV06_01341 I 0.000
PV08_00166 Exophiala spinifera PV08_00166 I 0.000
PV05_04966 Exophiala xenobiotica PV05_04966 I 0.000
Z517_07454 Fonsecaea pedrosoi Z517_07454 I 0.000
Z517_04277 Fonsecaea pedrosoi Z517_04277 I 0.000
HCBG_08757 Histoplasma capsulatum HCBG_08757 I 0.000
MCYG_04594 Microsporum canis MCYG_04594 I 0.000
MGYG_08173 Microsporum gypseum MGYG_08173 I 0.000
NFIA_096840 Neosartorya fischeri CADNFIAG00009134 I 0.000
PABG_02017 Paracoccidioides brasiliensis PABG_02017 I 0.000
PAAG_01359 Paracoccidioides sp lutzii PAAG_01359 I 0.000
Pc21g11250 Penicillium chrysogenum Pc21g11250 I 0.000
PITC_050730 Penicillium italicum PITC_050730 I 0.000
PMAA_086890 Penicillium marneffei PMAA_086890 I 0.000
PDE_00959 Penicillium oxalicum PDE_00959 I 0.000
PCH_Pc21g11250 Penicillium rubens PCH_Pc21g11250 I 0.000
U727_00433961191 Penicillium solitum U727_00433961191 I 0.000
Z518_08360 Rhinocladiella mackenziei Z518_08360 I 0.000
PMAA_086890 Talaromyces marneffei PMAA_086890 I 0.000
TSTA_122170 Talaromyces stipitatus TSTA_122170 I 0.000
TRIREDRAFT_72057 Trichoderma reesei TRIREDRAFT_72057 I 0.000
TRIVIDRAFT_14401 Trichoderma virens TRIVIDRAFT_14401 I 0.000
TEQG_02389 Trichophyton equinum TEQG_02389 I 0.000
H101_02474 Trichophyton interdigitale H101_02474 I 0.000
H102_05466 Trichophyton rubrum H102_05466 I 0.000
H105_05509 Trichophyton soudanense H105_05509 I 0.000
TRV_07860 Trichophyton verrucosum TRV_07860 I 0.000
GSTUM_00012254001 Tuber melanosporum GSTUM_00012254001 I 0.000
UREG_01649 Uncinocarpus reesii UREG_01649 I 0.000