MDP0000125673 (Malus domestica)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 MDP0000125673 T008955_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAP2-10
M00850_2.00 		Arabidopsis thaliana
NNRCCGHCNN
NNGDCGGYNN		 PBM
Franco-Zorrilla et al.(2014)
DEAR4 		0.811 0.980
ERF010
M06690_2.00 		Arabidopsis thaliana
HHNHHDYCACCGHCD
HGDCGGTGRHDDNDD		 Dap-seq
OMalley et al.(2016)
DEAR2_col_a 		0.810 0.940
ERF010
M06691_2.00 		Arabidopsis thaliana
NNNHDBCACCGACAH
DTGTCGGTGVHDNNN		 Dap-seq
OMalley et al.(2016)
DEAR2_colamp_a 		0.810 0.940
ERF011
M06628_2.00 		Arabidopsis thaliana
YHNHHDYCACCGHCN
NGDCGGTGRHDDNDR		 Dap-seq
OMalley et al.(2016)
CEJ1_col_a 		0.809 0.920
ERF011
M06629_2.00 		Arabidopsis thaliana
NDNCACCGACMHH
DDKGTCGGTGNHN		 Dap-seq
OMalley et al.(2016)
CEJ1_colamp_a 		0.809 0.920
ERF008
M00844_2.00 		Arabidopsis thaliana
SHRCCGHC
GDCGGYDS		 PBM
Franco-Zorrilla et al.(2014)
DEAR3 		0.801 0.960
ERF008
M01048_2.00 		Arabidopsis thaliana
CRCCGMCN
NGKCGGYG		 PBM
Sullivan et al.(2014)
pTH7672 		0.801 0.960
ERF008
M06602_2.00 		Arabidopsis thaliana
NNNNNBCACCGACAHHN
NDDTGTCGGTGVNNNNN		 Dap-seq
OMalley et al.(2016)
DEAR3_col_a 		0.801 0.960
ERF008
M06603_2.00 		Arabidopsis thaliana
NNBCACCGACAWH
DWTGTCGGTGVNN		 Dap-seq
OMalley et al.(2016)
DEAR3_colamp_a 		0.801 0.960
RAP2-9
M06633_2.00 		Arabidopsis thaliana
NNNNNNNDBCACCGACMHH
DDKGTCGGTGVHNNNNNNN		 Dap-seq
OMalley et al.(2016)
DEAR5_col_a 		0.782 0.960
RAP2-9
M06634_2.00 		Arabidopsis thaliana
NCACCGACMHH
DDKGTCGGTGN		 Dap-seq
OMalley et al.(2016)
DEAR5_colamp_a 		0.782 0.960
RAP2-1
M06582_2.00 		Arabidopsis thaliana
NHDYCRCCGMCAH
DTGKCGGYGRHDN		 Dap-seq
OMalley et al.(2016)
RAP21_col_a 		0.749 0.880
RAP2-1
M06583_2.00 		Arabidopsis thaliana
NHDBCACCGACAHHDNNNNN
NNNNNHDDTGTCGGTGVHDN		 Dap-seq
OMalley et al.(2016)
RAP21_colamp_a 		0.749 0.880
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000125673 AP2 20 71

Links

Other AP2 family TFs
Other Malus domestica TFs

162 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00051p00204250 Amborella trichopoda AMTR_s00051p00204250 I 0.708
Aquca_007_00717 Aquilegia coerulea Aquca_007_00717 I 0.815
Aquca_010_00625 Aquilegia coerulea Aquca_010_00625 I 0.813
DEAR3 Arabidopsis lyrata fgenesh2_kg.4__264__AT2G23340.1 I 0.811
CEJ1 Arabidopsis lyrata fgenesh2_kg.5__1372__AT3G50260.1 I 0.809
RAP2.9 Arabidopsis lyrata fgenesh2_kg.6__2823__AT4G06746.1 I 0.782
RAP2.1 Arabidopsis lyrata scaffold_104275.1 I 0.751
RAP2.10 Arabidopsis lyrata scaffold_700370.1 I 0.811
DEAR2 Arabidopsis lyrata scaffold_803390.1 I 0.810
RAP2-1 Arabidopsis thaliana AT1G46768 D 0.749
ERF008 Arabidopsis thaliana AT2G23340 D 0.801
ERF011 Arabidopsis thaliana AT3G50260 D 0.809
RAP2-9 Arabidopsis thaliana AT4G06746 D 0.782
RAP2-10 Arabidopsis thaliana AT4G36900 D 0.811
ERF010 Arabidopsis thaliana AT5G67190 D 0.810
Bostr.0568s0141 Boechera stricta Bostr.0568s0141 I 0.810
Bostr.12302s0138 Boechera stricta Bostr.12302s0138 I 0.795
Bostr.27895s0153 Boechera stricta Bostr.27895s0153 I 0.811
Bostr.3877s0058 Boechera stricta Bostr.3877s0058 I 0.745
Bostr.6864s0220 Boechera stricta Bostr.6864s0220 I 0.772
Bostr.7867s1581 Boechera stricta Bostr.7867s1581 I 0.811
BRADI1G48320 Brachypodium distachyon BRADI1G48320 I 0.774
BRADI5G24110 Brachypodium distachyon BRADI5G24110 I 0.758
Bo1g004940 Brassica oleracea Bo1g004940 I 0.801
Bo4g151460 Brassica oleracea Bo4g151460 I 0.811
Bo7g063980 Brassica oleracea Bo7g063980 I 0.810
Bo7g118430 Brassica oleracea Bo7g118430 I 0.811
Bo8g079660 Brassica oleracea Bo8g079660 I 0.810
Bo9g020380 Brassica oleracea Bo9g020380 I 0.804
Bra011744 Brassica rapa Bra011744 I 0.776
Bra012140 Brassica rapa Bra012140 I 0.789
Bra014056 Brassica rapa Bra014056 I 0.805
Bra017811 Brassica rapa Bra017811 I 0.811
Bra032173 Brassica rapa Bra032173 I 0.811
Bra036061 Brassica rapa Bra036061 I 0.810
Bra037124 Brassica rapa Bra037124 I 0.804
PK15612.1 Cannabis sativa PK15612.1 I 0.794
Cagra.0342s0005 Capsella grandiflora Cagra.0342s0005 I 0.810
Cagra.0706s0004 Capsella grandiflora Cagra.0706s0004 I 0.809
Cagra.1735s0005 Capsella grandiflora Cagra.1735s0005 I 0.795
Cagra.29993s0001 Capsella grandiflora Cagra.29993s0001 I 0.811
Cagra.4909s0050 Capsella grandiflora Cagra.4909s0050 I 0.811
Carubv10005767m.g Capsella rubella Carubv10005767m.g I 0.811
Carubv10010891m.g Capsella rubella Carubv10010891m.g I 0.795
Carubv10018162m.g Capsella rubella Carubv10018162m.g I 0.809
Carubv10024198m.g Capsella rubella Carubv10024198m.g I 0.811
Carubv10027999m.g Capsella rubella Carubv10027999m.g I 0.810
Ca_01556 Cicer arietinum Ca_01556 I 0.752
Ca_02170 Cicer arietinum Ca_02170 I 0.792
Cla014175 Citrullus lanatus Cla014175 I 0.776
Cla020550 Citrullus lanatus Cla020550 I 0.760
Cla020961 Citrullus lanatus Cla020961 I 0.805
Cla022937 Citrullus lanatus Cla022937 I 0.799
Ciclev10002733m.g Citrus clementina Ciclev10002733m.g I 0.811
Ciclev10026687m.g Citrus clementina Ciclev10026687m.g I 0.822
orange1.1g031669m.g Citrus sinensis orange1.1g031669m.g I 0.822
orange1.1g041516m.g Citrus sinensis orange1.1g041516m.g I 0.811
Cucsa.102560 Cucumis sativus Cucsa.102560 I 0.776
Cucsa.352470 Cucumis sativus Cucsa.352470 I 0.805
Cucsa.367300 Cucumis sativus Cucsa.367300 I 0.760
Cucsa.395960 Cucumis sativus Cucsa.395960 I 0.799
Eucgr.F00192 Eucalyptus grandis Eucgr.F00192 I 0.803
Eucgr.F02317 Eucalyptus grandis Eucgr.F02317 I 0.805
Eucgr.F02319 Eucalyptus grandis Eucgr.F02319 I 0.805
Eucgr.H02094 Eucalyptus grandis Eucgr.H02094 I 0.822
Thhalv10000354m.g Eutrema salsugineum Thhalv10000354m.g I 0.769
Thhalv10004985m.g Eutrema salsugineum Thhalv10004985m.g I 0.810
Thhalv10026288m.g Eutrema salsugineum Thhalv10026288m.g I 0.811
Thhalv10029052m.g Eutrema salsugineum Thhalv10029052m.g I 0.773
gene09137-v1.0-hybrid Fragaria vesca gene09137-v1.0-hybrid I 0.799
gene23873-v1.0-hybrid Fragaria vesca gene23873-v1.0-hybrid I 0.823
GLYMA01G39540 Glycine max GLYMA01G39540 I 0.794
GLYMA04G04355 Glycine max GLYMA04G04355 I 0.793
GLYMA05G19050 Glycine max GLYMA05G19050 I 0.793
GLYMA06G04490 Glycine max GLYMA06G04490 I 0.793
GLYMA11G05700 Glycine max GLYMA11G05700 I 0.794
GLYMA14G09320 Glycine max GLYMA14G09320 I 0.805
GLYMA17G18580 Glycine max GLYMA17G18580 I 0.780
GLYMA17G35860 Glycine max GLYMA17G35860 I 0.799
Gorai.003G026100 Gossypium raimondii Gorai.003G026100 I 0.822
Gorai.003G099700 Gossypium raimondii Gorai.003G099700 I 0.792
Gorai.008G077900 Gossypium raimondii Gorai.008G077900 I 0.822
Gorai.009G214300 Gossypium raimondii Gorai.009G214300 I 0.805
Gorai.010G021900 Gossypium raimondii Gorai.010G021900 I 0.792
MLOC_81350 Hordeum vulgare MLOC_81350 I 0.760
LPERR04G23120 Leersia perrieri LPERR04G23120 I 0.758
LPERR06G04000 Leersia perrieri LPERR06G04000 I 0.774
Lus10009373.g Linum usitatissimum Lus10009373.g I 0.771
Lus10010043.g Linum usitatissimum Lus10010043.g I 0.815
Lus10018727.g Linum usitatissimum Lus10018727.g I 0.813
LjSGA_004289.2 Lotus japonicus LjSGA_004289.2 I 0.794
LjSGA_007705.1 Lotus japonicus LjSGA_007705.1 I 0.755
LjSGA_134387.1 Lotus japonicus LjSGA_134387.1 I 0.783
MDP0000179962 Malus domestica MDP0000179962 I 0.823
MDP0000756341 Malus domestica MDP0000756341 I 0.774
cassava17493.valid.m1 Manihot esculenta cassava17493.valid.m1 I 0.797
cassava47353.m1 Manihot esculenta cassava47353.m1 I 0.813
cassava9153.m1 Manihot esculenta cassava9153.m1 I 0.813
MTR_1g019110 Medicago truncatula MTR_1g019110 I 0.794
MTR_3g102100 Medicago truncatula MTR_3g102100 I 0.752
MTR_5g016750 Medicago truncatula MTR_5g016750 I 0.792
mgf000289m Mimulus guttatus mgf000289m I 0.800
mgf006561m Mimulus guttatus mgf006561m I 0.807
mgf021115m Mimulus guttatus mgf021115m I 0.813
mgf025363m Mimulus guttatus mgf025363m I 0.788
GSMUA_Achr3G13190_001 Musa acuminata GSMUA_Achr3G13190_001 I 0.801
GSMUA_Achr4G20280_001 Musa acuminata GSMUA_Achr4G20280_001 I 0.784
GSMUA_Achr5G22190_001 Musa acuminata GSMUA_Achr5G22190_001 I 0.777
GSMUA_Achr7G05410_001 Musa acuminata GSMUA_Achr7G05410_001 I 0.745
GSMUA_Achr7G20800_001 Musa acuminata GSMUA_Achr7G20800_001 I 0.742
GSMUA_Achr8G15640_001 Musa acuminata GSMUA_Achr8G15640_001 I 0.732
GSMUA_Achr9G11310_001 Musa acuminata GSMUA_Achr9G11310_001 I 0.744
GSMUA_AchrUn_randomG12040_001 Musa acuminata GSMUA_AchrUn_randomG12040_001 I 0.797
GSMUA_AchrUn_randomG26940_001 Musa acuminata GSMUA_AchrUn_randomG26940_001 I 0.789
OBART06G04460 Oryza barthii OBART06G04460 I 0.774
ORGLA04G0237600 Oryza glaberrima ORGLA04G0237600 I 0.758
ORGLA06G0041000 Oryza glaberrima ORGLA06G0041000 I 0.774
OGLUM04G27370 Oryza glumaepatula OGLUM04G27370 I 0.758
OGLUM06G04560 Oryza glumaepatula OGLUM06G04560 I 0.774
BGIOSGA014220 Oryza indica BGIOSGA014220 I 0.758
BGIOSGA014221 Oryza indica BGIOSGA014221 I 0.758
BGIOSGA022380 Oryza indica BGIOSGA022380 I 0.774
OMERI04G22870 Oryza meridionalis OMERI04G22870 I 0.758
ONIVA04G25910 Oryza nivara ONIVA04G25910 I 0.758
ONIVA06G05630 Oryza nivara ONIVA06G05630 I 0.774
OPUNC06G04240 Oryza punctata OPUNC06G04240 I 0.774
ORUFI06G04420 Oryza rufipogon ORUFI06G04420 I 0.774
OS04G0648900 Oryza sativa OS04G0648900 I 0.758
OS06G0166400 Oryza sativa OS06G0166400 I 0.774
Pavir.J04844 Panicum virgatum Pavir.J04844 I 0.758
Pavir.J20437 Panicum virgatum Pavir.J20437 I 0.774
Pavir.J27349 Panicum virgatum Pavir.J27349 I 0.758
Pavir.J34361 Panicum virgatum Pavir.J34361 I 0.774
POPTR_0002s12550 Populus trichocarpa POPTR_0002s12550 I 0.813
POPTR_0005s18430 Populus trichocarpa POPTR_0005s18430 I 0.797
POPTR_0007s10750 Populus trichocarpa POPTR_0007s10750 I 0.797
POPTR_0014s02530 Populus trichocarpa POPTR_0014s02530 I 0.813
PRUPE_ppa012302mg Prunus persica PRUPE_ppa012302mg I 0.780
PRUPE_ppa012516mg Prunus persica PRUPE_ppa012516mg I 0.821
28718.m000038 Ricinus communis 28718.m000038 I 0.821
30170.m013843 Ricinus communis 30170.m013843 I 0.813
SapurV1A.0167s0190 Salix purpurea SapurV1A.0167s0190 I 0.815
SapurV1A.0423s0180 Salix purpurea SapurV1A.0423s0180 I 0.813
SapurV1A.0689s0100 Salix purpurea SapurV1A.0689s0100 I 0.797
SapurV1A.1340s0030 Salix purpurea SapurV1A.1340s0030 I 0.782
SapurV1A.1616s0040 Salix purpurea SapurV1A.1616s0040 I 0.782
SapurV1A.2355s0030 Salix purpurea SapurV1A.2355s0030 I 0.813
Solyc04g078640.1 Solanum lycopersicum Solyc04g078640.1 I 0.800
PGSC0003DMG400004005 Solanum tuberosum PGSC0003DMG400004005 I 0.812
PGSC0003DMG400007951 Solanum tuberosum PGSC0003DMG400007951 I 0.800
PGSC0003DMG400034101 Solanum tuberosum PGSC0003DMG400034101 I 0.777
Sb06g030660 Sorghum bicolor Sb06g030660 I 0.758
Sb10g004580 Sorghum bicolor Sb10g004580 I 0.774
TCM_000669 Theobroma cacao TCM_000669 I 0.822
TCM_033791 Theobroma cacao TCM_033791 I 0.803
Traes_2BL_1E57B73B21 Triticum aestivum Traes_2BL_1E57B73B21 I 0.760
VIT_07s0031g00190 Vitis vinifera VIT_07s0031g00190 I 0.782
VIT_18s0001g10150 Vitis vinifera VIT_18s0001g10150 I 0.771
GRMZM2G119865 Zea mays GRMZM2G119865 I 0.742
GRMZM2G174917 Zea mays GRMZM2G174917 I 0.758
GRMZM2G301860 Zea mays GRMZM2G301860 I 0.741
GRMZM2G421033 Zea mays GRMZM2G421033 I 0.758