MDP0000907929 (Malus domestica)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 MDP0000907929 T009197_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
A5JTT1_WHEAT
M09700_2.00 		Triticum aestivum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ERF3_01 		0.734 0.755
ERF13
M01615_2.00 		Arabidopsis thaliana
VGCCGSCD
HGSCGGCB		 PBM
Weirauch et al.(2014)
pTH7283 		0.710 0.816
ERF13
M06612_2.00 		Arabidopsis thaliana
NHDBMGCCGCCDYHD
HDRHGGCGGCKVHDN		 Dap-seq
OMalley et al.(2016)
ERF13_colamp_a 		0.710 0.816
ERF13
M06613_2.00 		Arabidopsis thaliana
HDBMGCCGCCDYHDN
NHDRHGGCGGCKVHD		 Dap-seq
OMalley et al.(2016)
ERF13_col_b 		0.710 0.816
ERF1A
M00848_2.00 		Arabidopsis thaliana
NNNNRNN
NNYNNNN		 PBM
Franco-Zorrilla et al.(2014)
ATERF1 		0.678 0.776
ERF1A
M00720_2.00 		Arabidopsis thaliana
NMGCCRNCN
NGNYGGCKN		 PBM
Chang et al.(2013)
pTH7202 		0.678 0.776
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000907929 AP2 128 180

Links

Other AP2 family TFs
Other Malus domestica TFs

140 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_025_00333 Aquilegia coerulea Aquca_025_00333 I 0.000
Aquca_002_00170 Aquilegia coerulea Aquca_002_00170 I 0.000
WER Arabidopsis lyrata fgenesh2_kg.6__1454__AT5G14750.1 I 0.000
GL1 Arabidopsis lyrata fgenesh1_pg.C_scaffold_5000559 I 0.000
WER Arabidopsis thaliana AT5G14750 D 0.000
GL1 Arabidopsis thaliana AT3G27920 I 0.000
MYB23 Arabidopsis thaliana AT5G40330 D 0.000
Bostr.7200s0005 Boechera stricta Bostr.7200s0005 I 0.000
Bostr.2902s0211 Boechera stricta Bostr.2902s0211 I 0.000
Bostr.1460s0063 Boechera stricta Bostr.1460s0063 I 0.000
Bostr.0556s0467 Boechera stricta Bostr.0556s0467 I 0.000
Bo9g165670 Brassica oleracea Bo9g165670 I 0.000
Bo2g012170 Brassica oleracea Bo2g012170 I 0.000
Bra023486 Brassica rapa Bra023486 I 0.000
Bra008740 Brassica rapa Bra008740 I 0.000
Bra025311 Brassica rapa Bra025311 I 0.000
Bra025589 Brassica rapa Bra025589 I 0.000
Bra039065 Brassica rapa Bra039065 I 0.000
Cagra.3166s0078 Capsella grandiflora Cagra.3166s0078 I 0.000
Cagra.3160s0003 Capsella grandiflora Cagra.3160s0003 I 0.000
Cagra.4961s0006 Capsella grandiflora Cagra.4961s0006 I 0.000
Carubv10018791m.g Capsella rubella Carubv10018791m.g I 0.000
Carubv10001990m.g Capsella rubella Carubv10001990m.g I 0.000
Carubv10005698m.g Capsella rubella Carubv10005698m.g I 0.000
evm.TU.supercontig_124.57 Carica papaya evm.TU.supercontig_124.57 I 0.000
Ciclev10017556m.g Citrus clementina Ciclev10017556m.g I 0.000
Ciclev10032713m.g Citrus clementina Ciclev10032713m.g I 0.000
orange1.1g047269m.g Citrus sinensis orange1.1g047269m.g I 0.000
Eucgr.B00373 Eucalyptus grandis Eucgr.B00373 I 0.000
Eucgr.I01791 Eucalyptus grandis Eucgr.I01791 I 0.000
Eucgr.J02212 Eucalyptus grandis Eucgr.J02212 I 0.000
Thhalv10028340m.g Eutrema salsugineum Thhalv10028340m.g I 0.000
Thhalv10005428m.g Eutrema salsugineum Thhalv10005428m.g I 0.000
Thhalv10014715m.g Eutrema salsugineum Thhalv10014715m.g I 0.000
Gorai.012G061800 Gossypium raimondii Gorai.012G061800 I 0.000
Gorai.007G001800 Gossypium raimondii Gorai.007G001800 I 0.000
MDP0000650225 Malus domestica MDP0000650225 I 0.000
MDP0000578193 Malus domestica MDP0000578193 I 0.000
MDP0000537324 Malus domestica MDP0000537324 I 0.000
cassava27350.m1 Manihot esculenta cassava27350.m1 I 0.000
cassava26193.m1 Manihot esculenta cassava26193.m1 I 0.000
mgf023205m Mimulus guttatus mgf023205m I 0.000
POPTR_0015s08700 Populus trichocarpa POPTR_0015s08700 I 0.000
POPTR_0012s08190 Populus trichocarpa POPTR_0012s08190 I 0.000
POPTR_0015s08680 Populus trichocarpa POPTR_0015s08680 I 0.000
Pm006678 Prunus mume Pm006678 I 0.000
Pm024725 Prunus mume Pm024725 I 0.000
PRUPE_ppa010908mg Prunus persica PRUPE_ppa010908mg I 0.000
SapurV1A.1178s0050 Salix purpurea SapurV1A.1178s0050 I 0.000
SapurV1A.1404s0020 Salix purpurea SapurV1A.1404s0020 I 0.000
TCM_016886 Theobroma cacao TCM_016886 I 0.000
TCM_012057 Theobroma cacao TCM_012057 I 0.000
VIT_01s0127g00730 Vitis vinifera VIT_01s0127g00730 I 0.000
VIT_14s0066g01220 Vitis vinifera VIT_14s0066g01220 I 0.000
VIT_17s0000g08480 Vitis vinifera VIT_17s0000g08480 I 0.000