orange1.1g047950m.g (Citrus sinensis)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 orange1.1g047950m.g T009316_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF9
M06670_2.00 		Arabidopsis thaliana
YCDCCGCCGYCDHHDYHDYHN
NDRHDRHDDHGRCGGCGGHGR		 Dap-seq
OMalley et al.(2016)
ERF9_col_a 		0.687 0.725
ERF9
M06671_2.00 		Arabidopsis thaliana
NNHDSCGCCGYCRHWDN
NHWDYGRCGGCGSHDNN		 Dap-seq
OMalley et al.(2016)
ERF9_colamp_a 		0.687 0.725
PK19363.1
M01100_2.00 		Cannabis sativa
NMGCCGHMNN
NNKDCGGCKN		 PBM
Lambert et al.(2019)
pTH10138 		0.683 0.706
PK19363.1
M01643_2.00 		Cannabis sativa
CGCCGYCD
HGRCGGCG		 PBM
Weirauch et al.(2014)
pTH9609 		0.683 0.706
ERF4_TOBAC
M09728_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ERF3_02 		0.678 0.706
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g047950m AP2 155 206

Links

Other AP2 family TFs
Other Citrus sinensis TFs

219 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
WRKY38 Arabidopsis lyrata scaffold_602308.1 I
WRKY62 Arabidopsis lyrata Al_scaffold_0006_13 I
WRKY62 Arabidopsis thaliana AT5G01900 D
WRKY38 Arabidopsis thaliana AT5G22570 D
Bo01002s040 Brassica oleracea Bo01002s040 I
Bo2g024040 Brassica oleracea Bo2g024040 I
Bo5g068250 Brassica oleracea Bo5g068250 I
Bra002421 Brassica rapa Bra002421 I
Bra020196 Brassica rapa Bra020196 I
Bra020197 Brassica rapa Bra020197 I
Bra023211 Brassica rapa Bra023211 I
Bra028918 Brassica rapa Bra028918 I
Cagra.8153s0001 Capsella grandiflora Cagra.8153s0001 I
Carubv10002472m.g Capsella rubella Carubv10002472m.g I
evm.TU.supercontig_86.65 Carica papaya evm.TU.supercontig_86.65 I
Ca_18932 Cicer arietinum Ca_18932 I
Ca_12915 Cicer arietinum Ca_12915 I
Ca_09495 Cicer arietinum Ca_09495 I
Thhalv10014700m.g Eutrema salsugineum Thhalv10014700m.g I
GLYMA13G34240 Glycine max GLYMA13G34240 I
GLYMA13G34251 Glycine max GLYMA13G34251 I
GLYMA13G34281 Glycine max GLYMA13G34281 I
Gorai.005G003900 Gossypium raimondii Gorai.005G003900 I
Lus10025216.g Linum usitatissimum Lus10025216.g I
cassava36286.valid.m1 Manihot esculenta cassava36286.valid.m1 I
MTR_7g073380 Medicago truncatula MTR_7g073380 I
MTR_0002s1250 Medicago truncatula MTR_0002s1250 I
MTR_2g075610 Medicago truncatula MTR_2g075610 I
MTR_2g075680 Medicago truncatula MTR_2g075680 I
MTR_2g075690 Medicago truncatula MTR_2g075690 I
MTR_2g075700 Medicago truncatula MTR_2g075700 I
MTR_8g005750 Medicago truncatula MTR_8g005750 I
MTR_7g073430 Medicago truncatula MTR_7g073430 I
MTR_2g075750 Medicago truncatula MTR_2g075750 I
POPTR_0016s14490 Populus trichocarpa POPTR_0016s14490 I
POPTR_0006s10950 Populus trichocarpa POPTR_0006s10950 I
SapurV1A.0065s0580 Salix purpurea SapurV1A.0065s0580 I
Solyc09g015770.2 Solanum lycopersicum Solyc09g015770.2 I
PGSC0003DMG400029207 Solanum tuberosum PGSC0003DMG400029207 I
PGSC0003DMG400027582 Solanum tuberosum PGSC0003DMG400027582 I
PGSC0003DMG400008391 Solanum tuberosum PGSC0003DMG400008391 I
TCM_019689 Theobroma cacao TCM_019689 I