Pavir.Db00303 (Panicum virgatum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Pavir.Db00303 T009409_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Db00303.1.p AP2 17 68

Links

Other AP2 family TFs
Other Panicum virgatum TFs

20 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BRADI3G04410 Brachypodium distachyon BRADI3G04410 I 0.691
BRADI1G33550 Brachypodium distachyon BRADI1G33550 I 0.694
LPERR02G03850 Leersia perrieri LPERR02G03850 N 0.789
LPERR06G21240 Leersia perrieri LPERR06G21240 N 0.777
OBART02G04420 Oryza barthii OBART02G04420 N 0.754
OBART06G25530 Oryza barthii OBART06G25530 N 0.719
ORGLA02G0040900 Oryza glaberrima ORGLA02G0040900 N 0.789
OGLUM06G26910 Oryza glumaepatula OGLUM06G26910 N 0.719
OGLUM02G04330 Oryza glumaepatula OGLUM02G04330 N 0.789
OMERI02G05190 Oryza meridionalis OMERI02G05190 N 0.710
OMERI06G25700 Oryza meridionalis OMERI06G25700 N 0.719
ONIVA02G04420 Oryza nivara ONIVA02G04420 N 0.789
ONIVA06G28540 Oryza nivara ONIVA06G28540 N 0.719
OPUNC06G23160 Oryza punctata OPUNC06G23160 N 0.719
ORUFI06G27450 Oryza rufipogon ORUFI06G27450 N 0.719
OS06G0691100 Oryza sativa OS06G0691100 N 0.719
Sb10g028110 Sorghum bicolor Sb10g028110 N 0.754
GRMZM2G322672 Zea mays GRMZM2G322672 N 0.717
GRMZM2G175543 Zea mays GRMZM2G175543 N 0.798
GRMZM2G052720 Zea mays GRMZM2G052720 N 0.737