Pavir.Fa00114 (Panicum virgatum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Pavir.Fa00114 T009434_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Fa00114.1.p AP2 41 94

Links

Other AP2 family TFs
Other Panicum virgatum TFs

38 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_015_00242 Aquilegia coerulea Aquca_015_00242 N
Aquca_015_00243 Aquilegia coerulea Aquca_015_00243 N
Aquca_041_00050 Aquilegia coerulea Aquca_041_00050 N
Al_scaffold_0001_74 Arabidopsis lyrata Al_scaffold_0001_74 N
Al_scaffold_0002_1221 Arabidopsis lyrata Al_scaffold_0002_1221 N
AGL61 Arabidopsis lyrata Al_scaffold_0004_541 N
AGL62 Arabidopsis lyrata fgenesh1_pg.C_scaffold_8002041 N
fgenesh1_pm.C_scaffold_7000337 Arabidopsis lyrata fgenesh1_pm.C_scaffold_7000337 N
scaffold_302326.1 Arabidopsis lyrata scaffold_302326.1 I
scaffold_400572.1 Arabidopsis lyrata scaffold_400572.1 N
AGL28 Arabidopsis thaliana AT1G01530 N
AGL23 Arabidopsis thaliana AT1G65360 N
AGL61 Arabidopsis thaliana AT2G24840 N
AT4G36590 Arabidopsis thaliana AT4G36590 N
AGL62 Arabidopsis thaliana AT5G60440 I
Bostr.26833s0197 Boechera stricta Bostr.26833s0197 N
Bostr.5325s0071 Boechera stricta Bostr.5325s0071 N
Bostr.7867s1515 Boechera stricta Bostr.7867s1515 N
Bostr.8705s0016 Boechera stricta Bostr.8705s0016 N
Bo1g112460 Brassica oleracea Bo1g112460 N
Bo2g024910 Brassica oleracea Bo2g024910 N
Bo4g070340 Brassica oleracea Bo4g070340 N
Bo4g165540 Brassica oleracea Bo4g165540 N
Bo5g113750 Brassica oleracea Bo5g113750 N
Bo8g099550 Brassica oleracea Bo8g099550 N
Bo9g142570 Brassica oleracea Bo9g142570 N
Bra002480 Brassica rapa Bra002480 N
Bra007829 Brassica rapa Bra007829 N
Bra011938 Brassica rapa Bra011938 N
Bra020247 Brassica rapa Bra020247 N
Bra022434 Brassica rapa Bra022434 N
Bra026764 Brassica rapa Bra026764 N
Bra032057 Brassica rapa Bra032057 N
Bra038225 Brassica rapa Bra038225 N
Cagra.1004s0007 Capsella grandiflora Cagra.1004s0007 N
Cagra.1695s0023 Capsella grandiflora Cagra.1695s0023 N
Cagra.1968s0094 Capsella grandiflora Cagra.1968s0094 N
Cagra.2519s0016 Capsella grandiflora Cagra.2519s0016 N
Carubv10007644m.g Capsella rubella Carubv10007644m.g N
Carubv10010156m.g Capsella rubella Carubv10010156m.g N
Carubv10024914m.g Capsella rubella Carubv10024914m.g N
Carubv10028580m.g Capsella rubella Carubv10028580m.g N
evm.TU.contig_24748.4 Carica papaya evm.TU.contig_24748.4 N
evm.TU.contig_24748.5 Carica papaya evm.TU.contig_24748.5 N
evm.TU.contig_26687.3 Carica papaya evm.TU.contig_26687.3 N
evm.TU.contig_27313 Carica papaya evm.TU.contig_27313 N
evm.TU.contig_27553.3 Carica papaya evm.TU.contig_27553.3 N
evm.TU.contig_28241.1 Carica papaya evm.TU.contig_28241.1 N
evm.TU.contig_30005.4 Carica papaya evm.TU.contig_30005.4 N
evm.TU.contig_30114.1 Carica papaya evm.TU.contig_30114.1 N
evm.TU.contig_30689 Carica papaya evm.TU.contig_30689 N
evm.TU.contig_30908.1 Carica papaya evm.TU.contig_30908.1 N
evm.TU.contig_33038 Carica papaya evm.TU.contig_33038 N
evm.TU.contig_33091.3 Carica papaya evm.TU.contig_33091.3 N
evm.TU.contig_35157.1 Carica papaya evm.TU.contig_35157.1 N
evm.TU.contig_35157.2 Carica papaya evm.TU.contig_35157.2 N
evm.TU.contig_35713 Carica papaya evm.TU.contig_35713 N
evm.TU.contig_35751 Carica papaya evm.TU.contig_35751 N
evm.TU.contig_37082 Carica papaya evm.TU.contig_37082 N
evm.TU.contig_37107 Carica papaya evm.TU.contig_37107 N
evm.TU.contig_37271 Carica papaya evm.TU.contig_37271 N
evm.TU.contig_37489 Carica papaya evm.TU.contig_37489 N
evm.TU.contig_38155.1 Carica papaya evm.TU.contig_38155.1 N
evm.TU.contig_38552 Carica papaya evm.TU.contig_38552 N
evm.TU.contig_38604 Carica papaya evm.TU.contig_38604 N
evm.TU.contig_41453 Carica papaya evm.TU.contig_41453 N
evm.TU.contig_41623 Carica papaya evm.TU.contig_41623 N
evm.TU.supercontig_106.18 Carica papaya evm.TU.supercontig_106.18 N
evm.TU.supercontig_106.19 Carica papaya evm.TU.supercontig_106.19 N
evm.TU.supercontig_109.50 Carica papaya evm.TU.supercontig_109.50 N
evm.TU.supercontig_1259.1 Carica papaya evm.TU.supercontig_1259.1 N
evm.TU.supercontig_1455.2 Carica papaya evm.TU.supercontig_1455.2 N
evm.TU.supercontig_20.86 Carica papaya evm.TU.supercontig_20.86 N
evm.TU.supercontig_347.10 Carica papaya evm.TU.supercontig_347.10 N
evm.TU.supercontig_347.11 Carica papaya evm.TU.supercontig_347.11 N
evm.TU.supercontig_347.2 Carica papaya evm.TU.supercontig_347.2 N
evm.TU.supercontig_347.7 Carica papaya evm.TU.supercontig_347.7 N
evm.TU.supercontig_347.8 Carica papaya evm.TU.supercontig_347.8 N
evm.TU.supercontig_348.1 Carica papaya evm.TU.supercontig_348.1 N
evm.TU.supercontig_348.3 Carica papaya evm.TU.supercontig_348.3 N
evm.TU.supercontig_348.4 Carica papaya evm.TU.supercontig_348.4 N
evm.TU.supercontig_348.8 Carica papaya evm.TU.supercontig_348.8 N
evm.TU.supercontig_348.9 Carica papaya evm.TU.supercontig_348.9 N
evm.TU.supercontig_439.1 Carica papaya evm.TU.supercontig_439.1 N
evm.TU.supercontig_439.7 Carica papaya evm.TU.supercontig_439.7 N
evm.TU.supercontig_505.2 Carica papaya evm.TU.supercontig_505.2 N
evm.TU.supercontig_505.4 Carica papaya evm.TU.supercontig_505.4 N
evm.TU.supercontig_505.5 Carica papaya evm.TU.supercontig_505.5 N
evm.TU.supercontig_505.6 Carica papaya evm.TU.supercontig_505.6 N
evm.TU.supercontig_54.67 Carica papaya evm.TU.supercontig_54.67 N
evm.TU.supercontig_54.68 Carica papaya evm.TU.supercontig_54.68 N
evm.TU.supercontig_625.4 Carica papaya evm.TU.supercontig_625.4 N
evm.TU.supercontig_654.4 Carica papaya evm.TU.supercontig_654.4 N
evm.TU.supercontig_654.5 Carica papaya evm.TU.supercontig_654.5 N
evm.TU.supercontig_654.6 Carica papaya evm.TU.supercontig_654.6 N
evm.TU.supercontig_695.1 Carica papaya evm.TU.supercontig_695.1 N
evm.TU.supercontig_695.2 Carica papaya evm.TU.supercontig_695.2 N
evm.TU.supercontig_695.5 Carica papaya evm.TU.supercontig_695.5 N
evm.TU.supercontig_695.7 Carica papaya evm.TU.supercontig_695.7 N
evm.TU.supercontig_695.8 Carica papaya evm.TU.supercontig_695.8 N
evm.TU.supercontig_758.1 Carica papaya evm.TU.supercontig_758.1 N
evm.TU.supercontig_758.2 Carica papaya evm.TU.supercontig_758.2 N
evm.TU.supercontig_758.4 Carica papaya evm.TU.supercontig_758.4 N
evm.TU.supercontig_851.1 Carica papaya evm.TU.supercontig_851.1 N
evm.TU.supercontig_900.5 Carica papaya evm.TU.supercontig_900.5 N
Ca_04659 Cicer arietinum Ca_04659 N
Ca_04660 Cicer arietinum Ca_04660 N
Ca_04661 Cicer arietinum Ca_04661 N
Ca_04662 Cicer arietinum Ca_04662 N
Ca_04665 Cicer arietinum Ca_04665 N
Ca_07607 Cicer arietinum Ca_07607 N
Ca_26354 Cicer arietinum Ca_26354 N
Cla006571 Citrullus lanatus Cla006571 N
Ciclev10013802m.g Citrus clementina Ciclev10013802m.g N
Ciclev10030142m.g Citrus clementina Ciclev10030142m.g N
Ciclev10030387m.g Citrus clementina Ciclev10030387m.g N
orange1.1g036705m.g Citrus sinensis orange1.1g036705m.g N
orange1.1g039654m.g Citrus sinensis orange1.1g039654m.g N
orange1.1g045481m.g Citrus sinensis orange1.1g045481m.g N
Cucsa.298560 Cucumis sativus Cucsa.298560 N
Eucgr.G01185 Eucalyptus grandis Eucgr.G01185 N
Eucgr.H04834 Eucalyptus grandis Eucgr.H04834 N
Eucgr.I02506 Eucalyptus grandis Eucgr.I02506 N
Thhalv10000432m.g Eutrema salsugineum Thhalv10000432m.g N
Thhalv10000479m.g Eutrema salsugineum Thhalv10000479m.g N
Thhalv10003338m.g Eutrema salsugineum Thhalv10003338m.g N
Thhalv10003426m.g Eutrema salsugineum Thhalv10003426m.g N
Thhalv10012100m.g Eutrema salsugineum Thhalv10012100m.g I
Thhalv10015908m.g Eutrema salsugineum Thhalv10015908m.g N
Thhalv10017754m.g Eutrema salsugineum Thhalv10017754m.g N
Thhalv10022102m.g Eutrema salsugineum Thhalv10022102m.g N
Thhalv10027307m.g Eutrema salsugineum Thhalv10027307m.g N
gene01788-v1.0-hybrid Fragaria vesca gene01788-v1.0-hybrid I
gene01789-v1.0-hybrid Fragaria vesca gene01789-v1.0-hybrid N
GLYMA10G10610 Glycine max GLYMA10G10610 N
GLYMA10G10840 Glycine max GLYMA10G10840 N
GLYMA10G10860 Glycine max GLYMA10G10860 N
GLYMA10G10930 Glycine max GLYMA10G10930 N
GLYMA10G11450 Glycine max GLYMA10G11450 N
GLYMA10G40070 Glycine max GLYMA10G40070 N
GLYMA10G40080 Glycine max GLYMA10G40080 N
GLYMA13G39016 Glycine max GLYMA13G39016 N
GLYMA20G27320 Glycine max GLYMA20G27320 N
GLYMA20G27330 Glycine max GLYMA20G27330 N
GLYMA20G27341 Glycine max GLYMA20G27341 N
GLYMA20G27350 Glycine max GLYMA20G27350 N
Gorai.002G213500 Gossypium raimondii Gorai.002G213500 N
Gorai.005G263100 Gossypium raimondii Gorai.005G263100 N
Gorai.006G127800 Gossypium raimondii Gorai.006G127800 N
Lus10012449.g Linum usitatissimum Lus10012449.g N
Lus10020511.g Linum usitatissimum Lus10020511.g N
Lus10030663.g Linum usitatissimum Lus10030663.g N
Lus10030824.g Linum usitatissimum Lus10030824.g N
chr1.CM0088.830.nc Lotus japonicus chr1.CM0088.830.nc N
chr1.LjB17A22.10.nc Lotus japonicus chr1.LjB17A22.10.nc N
chr1.LjB17A22.60.nc Lotus japonicus chr1.LjB17A22.60.nc N
chr2.CM0904.120.nd Lotus japonicus chr2.CM0904.120.nd N
chr3.CM0279.290.nc Lotus japonicus chr3.CM0279.290.nc N
chr5.LjT39E05.40.nd Lotus japonicus chr5.LjT39E05.40.nd N
LjSGA_020620.1 Lotus japonicus LjSGA_020620.1 N
LjSGA_025167.1 Lotus japonicus LjSGA_025167.1 N
LjSGA_067087.1 Lotus japonicus LjSGA_067087.1 N
LjSGA_079719.1 Lotus japonicus LjSGA_079719.1 N
LjSGA_082681.2 Lotus japonicus LjSGA_082681.2 N
LjSGA_120826.2 Lotus japonicus LjSGA_120826.2 N
LjT01D09.100.nd Lotus japonicus LjT01D09.100.nd N
MDP0000168914 Malus domestica MDP0000168914 N
MDP0000221590 Malus domestica MDP0000221590 N
MDP0000233925 Malus domestica MDP0000233925 N
MDP0000278770 Malus domestica MDP0000278770 N
MDP0000434703 Malus domestica MDP0000434703 I
cassava21387.m1 Manihot esculenta cassava21387.m1 N
cassava21573.m1 Manihot esculenta cassava21573.m1 N
cassava33542.m1 Manihot esculenta cassava33542.m1 N
cassava41915.m1 Manihot esculenta cassava41915.m1 N
cassava8711.m1 Manihot esculenta cassava8711.m1 N
MTR_0121s0080 Medicago truncatula MTR_0121s0080 N
MTR_0121s0100 Medicago truncatula MTR_0121s0100 N
MTR_1g012570 Medicago truncatula MTR_1g012570 N
MTR_1g075570 Medicago truncatula MTR_1g075570 N
MTR_1g075600 Medicago truncatula MTR_1g075600 N
MTR_1g077360 Medicago truncatula MTR_1g077360 N
MTR_1g105905 Medicago truncatula MTR_1g105905 N
MTR_1g105910 Medicago truncatula MTR_1g105910 N
MTR_1g105920 Medicago truncatula MTR_1g105920 N
MTR_1g108500 Medicago truncatula MTR_1g108500 N
MTR_1g108510 Medicago truncatula MTR_1g108510 N
MTR_1g108580 Medicago truncatula MTR_1g108580 N
MTR_2g030740 Medicago truncatula MTR_2g030740 N
MTR_2g085250 Medicago truncatula MTR_2g085250 N
MTR_2g085280 Medicago truncatula MTR_2g085280 N
MTR_2g093190 Medicago truncatula MTR_2g093190 N
MTR_3g030770 Medicago truncatula MTR_3g030770 N
MTR_3g052870 Medicago truncatula MTR_3g052870 N
MTR_3g052920 Medicago truncatula MTR_3g052920 N
MTR_3g067875 Medicago truncatula MTR_3g067875 N
MTR_3g080940 Medicago truncatula MTR_3g080940 N
MTR_5g045560 Medicago truncatula MTR_5g045560 N
MTR_5g053390 Medicago truncatula MTR_5g053390 N
MTR_5g055100 Medicago truncatula MTR_5g055100 N
MTR_8g043650 Medicago truncatula MTR_8g043650 N
mgf018529m Mimulus guttatus mgf018529m N
mgf022147m Mimulus guttatus mgf022147m N
mgf022625m Mimulus guttatus mgf022625m N
mgf022790m Mimulus guttatus mgf022790m N
mgf024307m Mimulus guttatus mgf024307m N
POPTR_0007s03430 Populus trichocarpa POPTR_0007s03430 N
POPTR_0008s04110 Populus trichocarpa POPTR_0008s04110 N
POPTR_0009s08740 Populus trichocarpa POPTR_0009s08740 N
POPTR_0009s08750 Populus trichocarpa POPTR_0009s08750 N
POPTR_0017s07460 Populus trichocarpa POPTR_0017s07460 N
Pm021017 Prunus mume Pm021017 N
Pm021018 Prunus mume Pm021018 N
Pm021070 Prunus mume Pm021070 N
Pm021071 Prunus mume Pm021071 N
PRUPE_ppa017246mg Prunus persica PRUPE_ppa017246mg N
PRUPE_ppa022494mg Prunus persica PRUPE_ppa022494mg N
PRUPE_ppa026089mg Prunus persica PRUPE_ppa026089mg N
PRUPE_ppa026127mg Prunus persica PRUPE_ppa026127mg N
29613.m000367 Ricinus communis 29613.m000367 N
30099.m001671 Ricinus communis 30099.m001671 N
30099.m001672 Ricinus communis 30099.m001672 N
SapurV1A.0019s0690 Salix purpurea SapurV1A.0019s0690 N
SapurV1A.0019s0700 Salix purpurea SapurV1A.0019s0700 N
SapurV1A.0808s0160 Salix purpurea SapurV1A.0808s0160 N
SapurV1A.1128s0080 Salix purpurea SapurV1A.1128s0080 N
SapurV1A.1313s0050 Salix purpurea SapurV1A.1313s0050 N
Solyc01g060300.1 Solanum lycopersicum Solyc01g060300.1 N
Solyc01g060310.1 Solanum lycopersicum Solyc01g060310.1 N
Solyc01g106710.1 Solanum lycopersicum Solyc01g106710.1 N
Solyc01g106720.1 Solanum lycopersicum Solyc01g106720.1 N
Solyc01g106730.1 Solanum lycopersicum Solyc01g106730.1 N
Solyc04g025050.1 Solanum lycopersicum Solyc04g025050.1 N
Solyc04g025110.1 Solanum lycopersicum Solyc04g025110.1 N
Solyc04g047870.1 Solanum lycopersicum Solyc04g047870.1 N
PGSC0003DMG400005131 Solanum tuberosum PGSC0003DMG400005131 N
PGSC0003DMG400034832 Solanum tuberosum PGSC0003DMG400034832 N
PGSC0003DMG400035221 Solanum tuberosum PGSC0003DMG400035221 N
PGSC0003DMG400036160 Solanum tuberosum PGSC0003DMG400036160 N
PGSC0003DMG400039595 Solanum tuberosum PGSC0003DMG400039595 N
PGSC0003DMG400040127 Solanum tuberosum PGSC0003DMG400040127 N
PGSC0003DMG400040625 Solanum tuberosum PGSC0003DMG400040625 N
PGSC0003DMG400041035 Solanum tuberosum PGSC0003DMG400041035 N
PGSC0003DMG400043633 Solanum tuberosum PGSC0003DMG400043633 N
PGSC0003DMG400044387 Solanum tuberosum PGSC0003DMG400044387 N
PGSC0003DMG400044513 Solanum tuberosum PGSC0003DMG400044513 N
TCM_006323 Theobroma cacao TCM_006323 N
TCM_040735 Theobroma cacao TCM_040735 N
VIT_01s0010g01500 Vitis vinifera VIT_01s0010g01500 N
VIT_01s0010g01530 Vitis vinifera VIT_01s0010g01530 N
VIT_03s0088g00510 Vitis vinifera VIT_03s0088g00510 N
VIT_03s0088g00550 Vitis vinifera VIT_03s0088g00550 N
VIT_03s0088g00590 Vitis vinifera VIT_03s0088g00590 N
VIT_03s0088g00600 Vitis vinifera VIT_03s0088g00600 N
VIT_03s0088g00610 Vitis vinifera VIT_03s0088g00610 N