Thhalv10025268m.g (Eutrema salsugineum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Thhalv10025268m.g T009985_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q9XHD4_PETHY
M09737_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AP2A_01 		0.724 0.975
Q9XHD3_PETHY
M09736_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AP2B_01 		0.694 0.886
RAP2.7
M00845_2.00 		Arabidopsis thaliana
KRCGRGGD
HCCYCGYM		 PBM
Franco-Zorrilla et al.(2014)
TOE1 		0.692 0.911
P93632_MAIZE
M09712_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$GL15_01 		0.690 0.848
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10025268m AP2 135 164
Thhalv10025268m AP2 217 268

Links

Other AP2 family TFs
Other Eutrema salsugineum TFs

214 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_034_00401 Aquilegia coerulea Aquca_034_00401 I 0.000
LBD29 Arabidopsis lyrata fgenesh2_kg.5__2263__AT3G58190.1 I 0.000
LBD29 Arabidopsis thaliana AT3G58190 I 0.000
Bostr.20903s0070 Boechera stricta Bostr.20903s0070 I 0.000
BRADI1G75110 Brachypodium distachyon BRADI1G75110 I 0.000
BRADI3G55680 Brachypodium distachyon BRADI3G55680 I 0.000
Bo8g092560 Brassica oleracea Bo8g092560 I 0.000
Bra014581 Brassica rapa Bra014581 I 0.000
Bra016876 Brassica rapa Bra016876 N 0.000
Cagra.0686s0036 Capsella grandiflora Cagra.0686s0036 I 0.000
Carubv10019250m.g Capsella rubella Carubv10019250m.g I 0.000
Ca_12214 Cicer arietinum Ca_12214 I 0.000
Cla006088 Citrullus lanatus Cla006088 I 0.000
Ciclev10024416m.g Citrus clementina Ciclev10024416m.g I 0.000
orange1.1g040761m.g Citrus sinensis orange1.1g040761m.g I 0.000
Cucsa.053440 Cucumis sativus Cucsa.053440 I 0.000
Thhalv10006226m.g Eutrema salsugineum Thhalv10006226m.g I 0.000
gene08254-v1.0-hybrid Fragaria vesca gene08254-v1.0-hybrid I 0.000
MLOC_10783 Hordeum vulgare MLOC_10783 N 0.000
MLOC_10784 Hordeum vulgare MLOC_10784 I 0.000
MLOC_52276 Hordeum vulgare MLOC_52276 I 0.000
MLOC_61947 Hordeum vulgare MLOC_61947 I 0.000
LPERR02G31040 Leersia perrieri LPERR02G31040 I 0.000
LPERR03G03460 Leersia perrieri LPERR03G03460 I 0.000
LPERR03G03470 Leersia perrieri LPERR03G03470 I 0.000
cassava15612.m1 Manihot esculenta cassava15612.m1 I 0.000
GSMUA_Achr8G14330_001 Musa acuminata GSMUA_Achr8G14330_001 I 0.000
GSMUA_Achr1G01350_001 Musa acuminata GSMUA_Achr1G01350_001 I 0.000
GSMUA_Achr1G01360_001 Musa acuminata GSMUA_Achr1G01360_001 I 0.000
GSMUA_Achr11G02110_001 Musa acuminata GSMUA_Achr11G02110_001 I 0.000
GSMUA_Achr4G25190_001 Musa acuminata GSMUA_Achr4G25190_001 I 0.000
GSMUA_AchrUn_randomG23710_001 Musa acuminata GSMUA_AchrUn_randomG23710_001 I 0.000
OBART03G03820 Oryza barthii OBART03G03820 I 0.000
OBART03G03830 Oryza barthii OBART03G03830 I 0.000
OB03G13890 Oryza brachyantha OB03G13890 I 0.000
OB03G13880 Oryza brachyantha OB03G13880 I 0.000
OB02G44330 Oryza brachyantha OB02G44330 I 0.000
ORGLA03G0035900 Oryza glaberrima ORGLA03G0035900 I 0.000
ORGLA03G0035800 Oryza glaberrima ORGLA03G0035800 I 0.000
ORGLA02G0327800 Oryza glaberrima ORGLA02G0327800 I 0.000
OGLUM02G38740 Oryza glumaepatula OGLUM02G38740 I 0.000
OGLUM03G03700 Oryza glumaepatula OGLUM03G03700 I 0.000
BGIOSGA005344 Oryza indica BGIOSGA005344 I 0.000
BGIOSGA011445 Oryza indica BGIOSGA011445 I 0.000
BGIOSGA011866 Oryza indica BGIOSGA011866 I 0.000
OLONG_020840 Oryza longistaminata OLONG_020840 N 0.000
OMERI07G01670 Oryza meridionalis OMERI07G01670 N 0.000
OMERI02G35350 Oryza meridionalis OMERI02G35350 I 0.000
OMERI07G01660 Oryza meridionalis OMERI07G01660 I 0.000
ONIVA02G40360 Oryza nivara ONIVA02G40360 I 0.000
ONIVA03G03570 Oryza nivara ONIVA03G03570 I 0.000
ONIVA03G03580 Oryza nivara ONIVA03G03580 I 0.000
OPUNC02G34750 Oryza punctata OPUNC02G34750 I 0.000
OPUNC03G03520 Oryza punctata OPUNC03G03520 I 0.000
OPUNC03G03510 Oryza punctata OPUNC03G03510 I 0.000
ORUFI03G03550 Oryza rufipogon ORUFI03G03550 I 0.000
ORUFI03G03540 Oryza rufipogon ORUFI03G03540 I 0.000
ORUFI02G39110 Oryza rufipogon ORUFI02G39110 I 0.000
OS03G0149100 Oryza sativa OS03G0149100 I 0.000
OS03G0149000 Oryza sativa OS03G0149000 I 0.000
OS02G0820500 Oryza sativa OS02G0820500 I 0.000
Pavir.J24246 Panicum virgatum Pavir.J24246 I 0.000
Pavir.J03376 Panicum virgatum Pavir.J03376 I 0.000
Pavir.Ib00283 Panicum virgatum Pavir.Ib00283 I 0.000
Pavir.Ib00282 Panicum virgatum Pavir.Ib00282 I 0.000
Pavir.Ia04220 Panicum virgatum Pavir.Ia04220 I 0.000
Pavir.Aa00097 Panicum virgatum Pavir.Aa00097 I 0.000
Pavir.J39638 Panicum virgatum Pavir.J39638 I 0.000
PRUPE_ppa025349mg Prunus persica PRUPE_ppa025349mg I 0.000
SapurV1A.0006s0980 Salix purpurea SapurV1A.0006s0980 I 0.000
Si040019m.g Setaria italica Si040019m.g I 0.000
Si037727m.g Setaria italica Si037727m.g I 0.000
Si019578m.g Setaria italica Si019578m.g I 0.000
Sb01g046990 Sorghum bicolor Sb01g046990 I 0.000
Sb01g047000 Sorghum bicolor Sb01g047000 I 0.000
Sb04g037550 Sorghum bicolor Sb04g037550 I 0.000
Traes_6DL_850266B2A Triticum aestivum Traes_6DL_850266B2A I 0.000
Traes_6AL_D6045E37C Triticum aestivum Traes_6AL_D6045E37C I 0.000
Traes_4DL_43D63ABE3 Triticum aestivum Traes_4DL_43D63ABE3 I 0.000
Traes_4DL_05F87867C Triticum aestivum Traes_4DL_05F87867C N 0.000
Traes_4BS_B43A99154 Triticum aestivum Traes_4BS_B43A99154 N 0.000
Traes_4BL_F71DE14F7 Triticum aestivum Traes_4BL_F71DE14F7 N 0.000
Traes_4BL_A4D0F4AD6 Triticum aestivum Traes_4BL_A4D0F4AD6 I 0.000
Traes_4AL_CAF4E16B5 Triticum aestivum Traes_4AL_CAF4E16B5 I 0.000
Traes_4AL_3BA1D51E2 Triticum aestivum Traes_4AL_3BA1D51E2 N 0.000
TRIUR3_01477 Triticum urartu TRIUR3_01477 I 0.000
LBD16 Vitis vinifera VIT_07s0005g03030 I 0.000
AC149818.2_FG009 Zea mays AC149818.2_FG009 I 0.000
GRMZM2G075499 Zea mays GRMZM2G075499 I 0.000
GRMZM2G092483 Zea mays GRMZM2G092483 I 0.000
GRMZM2G092542 Zea mays GRMZM2G092542 I 0.000