chr1.CM0295.140.nd (Lotus japonicus)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 chr1.CM0295.140.nd T010144_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF095
M06624_2.00 		Arabidopsis thaliana
YCDCCGCCGCCRYHD
HDRYGGCGGCGGHGR		 Dap-seq
OMalley et al.(2016)
ESE1_col_a 		0.790 0.865
ERF095
M06625_2.00 		Arabidopsis thaliana
YHNYYDYHDCCGCCGCCDYH
DRHGGCGGCGGHDRHRRNDR		 Dap-seq
OMalley et al.(2016)
ESE1_colamp_a 		0.790 0.865
ERF096
M01630_2.00 		Arabidopsis thaliana
NVGCCGNCNN
NNGNCGGCBN		 PBM
Weirauch et al.(2014)
pTH7909 		0.787 0.769
ERF14
M01045_2.00 		Arabidopsis thaliana
NVGCCGNCN
NGNCGGCBN		 PBM
Sullivan et al.(2014)
pTH9793 		0.762 0.769
ERF5_TOBAC
M09729_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ERF4_02 		0.724 0.750
PK02330.1
M01095_2.00 		Cannabis sativa
NNNGCCGBCN
NGVCGGCNNN		 PBM
Lambert et al.(2019)
pTH10093 		0.723 0.750
ERF5
M00721_2.00 		Arabidopsis thaliana
NNNGSMRNMN
NKNYKSCNNN		 PBM
Chang et al.(2013)
pTH7197 		0.723 0.731
ERF5
M06674_2.00 		Arabidopsis thaliana
YCDYCKCCGCCGYCD
HGRCGGCGGMGRHGR		 Dap-seq
OMalley et al.(2016)
ERF5_col_a 		0.723 0.731
ERF5
M06675_2.00 		Arabidopsis thaliana
NHDBCGCCGCCRYHDNHDNNN
NNNHDNHDRYGGCGGCGVHDN		 Dap-seq
OMalley et al.(2016)
ERF5_colamp_a 		0.723 0.731
ERF105
M01632_2.00 		Arabidopsis thaliana
CGCCGGCM
KGCCGGCG		 PBM
Weirauch et al.(2014)
pTH7233 		0.721 0.692
ERF105
M06676_2.00 		Arabidopsis thaliana
NHNNNNNNNNHNNHDBCGCCGCCR
YGGCGGCGVHDNNDNNNNNNNNDN		 Dap-seq
OMalley et al.(2016)
ERF105_colamp_a 		0.721 0.692
ERF105
M06677_2.00 		Arabidopsis thaliana
HDSCGCCGCCRYHDH
DHDRYGGCGGCGSHD		 Dap-seq
OMalley et al.(2016)
ERF105_col 		0.721 0.692
ERF104
M06682_2.00 		Arabidopsis thaliana
NNHHDYMDCCGCCGCCRYH
DRYGGCGGCGGHKRHDDNN		 Dap-seq
OMalley et al.(2016)
ERF104_col_a 		0.717 0.654
ERF104
M06683_2.00 		Arabidopsis thaliana
BHDSCGCCGCCRYHD
HDRYGGCGGCGSHDV		 Dap-seq
OMalley et al.(2016)
ERF104_colamp_a 		0.717 0.654
Q7Y1W2_TOBAC
M09735_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CEF1_01 		0.713 0.692
RAP2-2
M00719_2.00 		Arabidopsis thaliana
NNRBYGNN
NNCRVYNN		 PBM
Chang et al.(2013)
pTH7227 		0.708 0.692
EREBP1
M09708_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$EREBP1_01 		0.701 0.654
ERF2_TOBAC
M09727_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ERF2_01 		0.700 0.712
LOC_Os08g36920
M01634_2.00 		Oryza sativa
NNNGSCGHNN
NNDCGSCNNN		 PBM
Weirauch et al.(2014)
pTH8596 		0.698 0.712
AT2G33710
M01613_2.00 		Arabidopsis thaliana
NSMGCCGHMN
NKDCGGCKSN		 PBM
Weirauch et al.(2014)
pTH7543 		0.697 0.712
AT2G33710
M06606_2.00 		Arabidopsis thaliana
DBCGCCGCCGYHDHHDNH
DNHDDHDRCGGCGGCGVH		 Dap-seq
OMalley et al.(2016)
At2g33710_colamp_a 		0.697 0.712
AT2G33710
M06607_2.00 		Arabidopsis thaliana
NHDYCKCCGCCGYMD
HKRCGGCGGMGRHDN		 Dap-seq
OMalley et al.(2016)
At2g33710_col 		0.697 0.712
Q2TN80_WHEAT
M09715_2.00 		Triticum aestivum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ERF1_02 		0.696 0.635
RAP2-3
M01050_2.00 		Arabidopsis thaliana
CGCCGCCR
YGGCGGCG		 PBM
Sullivan et al.(2014)
pTH8811 		0.695 0.692
RAP2-3
M00847_2.00 		Arabidopsis thaliana
NMGCCGCCDN
NHGGCGGCKN		 PBM
Franco-Zorrilla et al.(2014)
RAP2.3 		0.695 0.692
ERF1B
M01619_2.00 		Arabidopsis thaliana
NMGCCGCCRN
NYGGCGGCKN		 PBM
Weirauch et al.(2014)
pTH8795 		0.693 0.712
ERF1B
M06626_2.00 		Arabidopsis thaliana
NHNNHDYMGCCGCCRYHDNHDNNNNNNN
NNNNNNNHDNHDRYGGCGGCKRHDNNDN		 Dap-seq
OMalley et al.(2016)
ERF1_col_a 		0.693 0.712
ERF1B
M06627_2.00 		Arabidopsis thaliana
MGCCGCCD
HGGCGGCK		 Dap-seq
OMalley et al.(2016)
ERF1_colamp_a 		0.693 0.712
ERF1B
M09703_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ERF1_Q2_01 		0.693 0.712
ERF1B
M09704_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ERF1_Q2 		0.693 0.712
ERF091
M06638_2.00 		Arabidopsis thaliana
NNHNYHDCCGCCGCCRY
RYGGCGGCGGHDRNDNN		 Dap-seq
OMalley et al.(2016)
AT4G18450_col_a 		0.692 0.731
CRF2
M01622_2.00 		Arabidopsis thaliana
SCGCCGCC
GGCGGCGS		 PBM
Weirauch et al.(2014)
pTH8680 		0.686 0.635
ERF113
M01629_2.00 		Arabidopsis thaliana
NNGCCGHHNN
NNDDCGGCNN		 PBM
Weirauch et al.(2014)
pTH8097 		0.685 0.712
ERF1A
M00848_2.00 		Arabidopsis thaliana
NNNNRNN
NNYNNNN		 PBM
Franco-Zorrilla et al.(2014)
ATERF1 		0.685 0.750
ERF1A
M00720_2.00 		Arabidopsis thaliana
NMGCCRNCN
NGNYGGCKN		 PBM
Chang et al.(2013)
pTH7202 		0.685 0.750
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
chr1.CM0295.140.nd AP2 14 66

Links

Other AP2 family TFs
Other Lotus japonicus TFs

1182 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACRE_011600 Acremonium chrysogenum ACRE_011600 I
AB07914.1 Alternaria brassicicola AB07914.1 I
AOL_s00076g81 Arthrobotrys oligospora AOL_s00076g81 I
M437DRAFT_15090 Aureobasidium melanogenum M437DRAFT_15090 I
M438DRAFT_338286 Aureobasidium pullulans M438DRAFT_338286 I
AUEXF2481DRAFT_32739 Aureobasidium subglaciale AUEXF2481DRAFT_32739 I
BBA_01214 Beauveria bassiana BBA_01214 I
COCC4DRAFT_135921 Bipolaris maydis COCC4DRAFT_135921 I
COCMIDRAFT_97534 Bipolaris oryzae COCMIDRAFT_97534 I
COCSADRAFT_226282 Bipolaris sorokiniana COCSADRAFT_226282 I
COCSADRAFT_180514 Bipolaris sorokiniana COCSADRAFT_180514 I
COCVIDRAFT_17843 Bipolaris victoriae COCVIDRAFT_17843 I
COCVIDRAFT_115390 Bipolaris victoriae COCVIDRAFT_115390 I
COCCADRAFT_24603 Bipolaris zeicola COCCADRAFT_24603 I
BGHDH14_bgh04339 Blumeria graminis BGHDH14_bgh04339 I
Bcin01g08840 Botrytis cinerea Bcin01g08840 I
A1O1_01197 Capronia coronata A1O1_01197 I
A1O3_08778 Capronia epimyces A1O3_08778 I
PV04_00198 Capronia semiimmersa PV04_00198 I
CTHT_0053790 Chaetomium thermophilum CTHT_0053790 I
Z519_04692 Cladophialophora bantiana Z519_04692 I
G647_10093 Cladophialophora carrionii G647_10093 I
PV07_09313 Cladophialophora immunda PV07_09313 I
A1O5_06047 Cladophialophora psammophila A1O5_06047 I
A1O7_01726 Cladophialophora yegresii A1O7_01726 I
CPUR_04901 Claviceps purpurea CPUR_04901 I
fgenesh1_pm.C_scaffold_14000132 Cochliobolus heterostrophus C5 fgenesh1_pm.C_scaffold_14000132 I
CFIO01_13531 Colletotrichum fioriniae CFIO01_13531 I
CGGC5_9539 Colletotrichum gloeosporioides CGGC5_9539 I
GLRG_01394 Colletotrichum graminicola GLRG_01394 I
CH063_04081 Colletotrichum higginsianum CH063_04081 I
CSUB01_00364 Colletotrichum sublineola CSUB01_00364 I
W97_01424 Coniosporium apollinis W97_01424 I
W97_04202 Coniosporium apollinis W97_04202 I
CCM_01555 Cordyceps militaris CCM_01555 I
gw1.4.435.1 Cryphonectria parasitica gw1.4.435.1 I
HMPREF1541_06859 Cyphellophora europaea HMPREF1541_06859 I
DRE_06603 Drechslerella stenobrocha DRE_06603 I
ETH_00031100 Eimeria tenella ETH_00031100 I
EPUS_09213 Endocarpon pusillum EPUS_09213 I
EV44_g2383 Erysiphe necator EV44_g2383 I
A1O9_00742 Exophiala aquamarina A1O9_00742 I
HMPREF1120_00213 Exophiala dermatitidis HMPREF1120_00213 I
PV10_01993 Exophiala mesophila PV10_01993 I
PV06_04154 Exophiala oligosperma PV06_04154 I
PV11_09703 Exophiala sideris PV11_09703 I
PV08_04655 Exophiala spinifera PV08_04655 I
PV05_09944 Exophiala xenobiotica PV05_09944 I
Z517_02317 Fonsecaea pedrosoi Z517_02317 I
FFUJ_02729 Fusarium fujikuroi FFUJ_02729 I
FGRRES_07116 Fusarium graminearum FGRRES_07116 I
FOXG_01686 Fusarium oxysporum FOXG_01686 I
FPSE_02664 Fusarium pseudograminearum FPSE_02664 I
GGTG_01518 Gaeumannomyces graminis GGTG_01518 I
M7I_1578 Glarea lozoyensis M7I_1578 I
CMQ_8074 Grosmannia clavigera CMQ_8074 I
LEMA_P064360.1 Leptosphaeria maculans LEMA_P064360.1 I
MPH_08050 Macrophomina phaseolina MPH_08050 I
MGG_01641 Magnaporthe oryzae MGG_01641 I
MAPG_06737 Magnaporthe poae MAPG_06737 I
MBM_02410 Marssonina brunnea MBM_02410 I
MANI_030028 Metarhizium anisopliae MANI_030028 I
MBR_01483 Metarhizium brunneum MBR_01483 I
MGU_02157 Metarhizium guizhouense MGU_02157 I
MAJ_04030 Metarhizium majus MAJ_04030 I
X797_001988 Metarhizium robertsii X797_001988 I
MYCTH_2294934 Myceliophthora thermophila MYCTH_2294934 I
UCRNP2_5474 Neofusicoccum parvum UCRNP2_5474 N
NCU02819 Neurospora crassa NCU02819 D
estExt_fgenesh3_kg.C_40082 Neurospora discreta estExt_fgenesh3_kg.C_40082 I
NEUTE1DRAFT_106544 Neurospora tetrasperma NEUTE1DRAFT_106544 I
OIDMADRAFT_143526 Oidiodendron maius OIDMADRAFT_143526 I
OCS_01486 Ophiocordyceps sinensis OCS_01486 I
F503_04824 Ophiostoma piceae uamh F503_04824 I
PODANS_1_7390 Podospora anserina PODANS_1_7390 I
GMDG_05273 Pseudogymnoascus destructans GMDG_05273 I
V499_08602 Pseudogymnoascus pannorum V499_08602 I
PTT_17082 Pyrenophora teres PTT_17082 I
PTRG_02818 Pyrenophora triticirepentis PTRG_02818 I
Z518_04911 Rhinocladiella mackenziei Z518_04911 I
RO3G_09728 Rhizopus oryzae RO3G_09728 I
SAPIO_CDS3355 Scedosporium apiospermum SAPIO_CDS3355 I
SBOR_0403 Sclerotinia borealis SBOR_0403 I
SS1G_04584 Sclerotinia sclerotiorum SS1G_04584 I
SETTUDRAFT_157792 Setosphaeria turcica SETTUDRAFT_157792 I
SMAC_00615 Sordaria macrospora SMAC_00615 I
SPBR_04745 Sporothrix brasiliensis SPBR_04745 I
S40288_09735 Stachybotrys chartarum S40288_09735 I
SNOG_03674 Stagonospora nodorum SNOG_03674 I
THITE_2121767 Thielavia terrestris THITE_2121767 I
VHEMI10573 Torrubiella hemipterigena VHEMI10573 I
TRIATDRAFT_321166 Trichoderma atroviride TRIATDRAFT_321166 I
TRIVIDRAFT_228694 Trichoderma virens TRIVIDRAFT_228694 I
GSTUM_00011974001 Tuber melanosporum GSTUM_00011974001 I
PV09_06887 Verruconis gallopava PV09_06887 I
VDBG_04589 Verticillium albo atrum VDBG_04589 I
VDBG_04589 Verticillium alfalfae VDBG_04589 I
VDAG_09161 Verticillium dahliae VDAG_09161 I
VDAG_04140 Verticillium dahliae VDAG_04140 I