Bo8g070520 (Brassica oleracea)
ARID/BRIGHT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01388 (ARID) IPR001606 Bo8g070520 T014211_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARID6
M06694_2.00 		Arabidopsis thaliana
HAATTRAWTTN
NAAWTYAATTD		 Dap-seq
OMalley et al.(2016)
AT1G20910_col_a 		0.689 0.800
ARID3
M06695_2.00 		Arabidopsis thaliana
AAWWHNAAATYAAWW
WWTTRATTTNDWWTT		 Dap-seq
OMalley et al.(2016)
AT2G17410_col_a 		0.556 0.729
For this family, TFs with SR scores > 0.422 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo8g070520.1 ARID/BRIGHT 106 191

Links

Other ARID/BRIGHT family TFs
Other Brassica oleracea TFs

153 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MAF4 Arabidopsis lyrata Al_scaffold_0008_3055 I 0.000
MAF1 Arabidopsis lyrata fgenesh2_kg.2__2000__AT1G77080.2 I 0.000
fgenesh2_kg.233__4__AT5G65050.3 Arabidopsis lyrata fgenesh2_kg.233__4__AT5G65050.3 I 0.000
fgenesh2_kg.8__2543__AT5G65050.2 Arabidopsis lyrata fgenesh2_kg.8__2543__AT5G65050.2 I 0.000
FLC Arabidopsis lyrata scaffold_601028.1 I 0.000
AGL27 Arabidopsis thaliana AT1G77080 D 0.000
MAF5 Arabidopsis thaliana AT5G65080 I 0.000
FLC Arabidopsis thaliana AT5G10140 D 0.000
AGL31 Arabidopsis thaliana AT5G65050 I 0.000
MAF3 Arabidopsis thaliana AT5G65060 I 0.000
MAF4 Arabidopsis thaliana AT5G65070 I 0.000
Bostr.0568s0285 Boechera stricta Bostr.0568s0285 I 0.000
Bostr.13175s0088 Boechera stricta Bostr.13175s0088 I 0.000
Bostr.18351s0063 Boechera stricta Bostr.18351s0063 I 0.000
Bo01054s010 Brassica oleracea Bo01054s010 I 0.000
Bo9g173400 Brassica oleracea Bo9g173400 I 0.000
Bo9g173370 Brassica oleracea Bo9g173370 I 0.000
Bo3g100570 Brassica oleracea Bo3g100570 I 0.000
Bo3g100540 Brassica oleracea Bo3g100540 I 0.000
Bo3g024250 Brassica oleracea Bo3g024250 I 0.000
Bo3g005470 Brassica oleracea Bo3g005470 I 0.000
Bo2g166500 Brassica oleracea Bo2g166500 I 0.000
Bo13628s010 Brassica oleracea Bo13628s010 I 0.000
Bra031888 Brassica rapa Bra031888 I 0.000
Bra031884 Brassica rapa Bra031884 I 0.000
Bra028599 Brassica rapa Bra028599 I 0.000
Bra024351 Brassica rapa Bra024351 I 0.000
Bra024350 Brassica rapa Bra024350 I 0.000
Bra022771 Brassica rapa Bra022771 I 0.000
Bra009055 Brassica rapa Bra009055 I 0.000
Bra006051 Brassica rapa Bra006051 I 0.000
Bra031886 Brassica rapa Bra031886 I 0.000
Cagra.0450s0030 Capsella grandiflora Cagra.0450s0030 I 0.000
Cagra.1085s0045 Capsella grandiflora Cagra.1085s0045 I 0.000
Cagra.0917s0081 Capsella grandiflora Cagra.0917s0081 I 0.000
Cagra.0917s0080 Capsella grandiflora Cagra.0917s0080 I 0.000
Cagra.0917s0078 Capsella grandiflora Cagra.0917s0078 I 0.000
Carubv10020979m.g Capsella rubella Carubv10020979m.g I 0.000
Carubv10028173m.g Capsella rubella Carubv10028173m.g I 0.000
Thhalv10004949m.g Eutrema salsugineum Thhalv10004949m.g I 0.000
Thhalv10005413m.g Eutrema salsugineum Thhalv10005413m.g I 0.000
Thhalv10014726m.g Eutrema salsugineum Thhalv10014726m.g I 0.000
cassava15798.m1 Manihot esculenta cassava15798.m1 I 0.000
POPTR_0003s16870 Populus trichocarpa POPTR_0003s16870 I 0.000
POPTR_0003s16840 Populus trichocarpa POPTR_0003s16840 I 0.000
SapurV1A.0658s0010 Salix purpurea SapurV1A.0658s0010 I 0.000
SapurV1A.1446s0020 Salix purpurea SapurV1A.1446s0020 I 0.000
Traes_4BL_9A17EA3B7 Triticum aestivum Traes_4BL_9A17EA3B7 I 0.000