CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CapteG64285
(
Capitella teleta
)
ARID/BRIGHT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01388 (ARID)
IPR001606
CapteG64285
T014273_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ARID3A
M01658_2.00
Microcebus murinus
NDATHAWDN
NHWTDATHN
PBM
Weirauch et al.(2014)
pTH9214
0.696
0.895
Arid3a
M00115_2.00
Mus musculus
NDATHADDN
NHHTDATHN
PBM
Badis et al.(2009)
Arid3a_3875
0.696
0.895
Arid3a
M01660_2.00
Mus musculus
NDATHAADN
NHTTDATHN
PBM
Weirauch et al.(2014)
pTH5169
0.696
0.895
Arid3a
M02651_2.00
Mus musculus
ATYAAA
TTTRAT
SELEX
Mathelier et al.(2014)
MA0151.1
0.696
0.895
ARID3A
M09766_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$DRI1_01
0.696
0.895
ARID3A
M01662_2.00
Procavia capensis
NNATHDNNN
NNNHDATNN
PBM
Weirauch et al.(2014)
pTH9384
0.696
0.884
Arid3b
M01659_2.00
Mus musculus
NNDATTAAWWN
NWWTTAATHNN
PBM
Weirauch et al.(2014)
pTH4425
0.678
0.837
DDB_G0275333
M01656_2.00
Dictyostelium discoideum
NNATHDNNNN
NNNNHDATNN
PBM
Weirauch et al.(2014)
pTH5168
0.676
0.488
ACYPI009013
M01655_2.00
Acyrthosiphon pisum
NDATHAADN
NHTTDATHN
PBM
Weirauch et al.(2014)
pTH5117
0.668
0.698
cfi-1
M01667_2.00
Caenorhabditis elegans
NNATHDNN
NNHDATNN
PBM
Weirauch et al.(2014)
pTH5118
0.658
0.802
retn
M01664_2.00
Drosophila melanogaster
NDATHRNN
NNYDATHN
PBM
Weirauch et al.(2014)
pTH5119
0.645
0.837
retn
M03590_2.00
Drosophila melanogaster
NNATTRATHN
NDATYAATNN
SELEX
Nitta et al.(2015)
retn_1
0.645
0.837
retn
M05899_2.00
Drosophila melanogaster
AATYAAAM
KTTTRATT
B1H
Zhu et al.(2011)
retn_SANGER_5_FBgn0004795
0.645
0.837
retn
M09768_2.00
Drosophila melanogaster
NNRATTAADN
NHTTAATYNN
Transfac
Matys et al.(2006)
I$DRI_01
0.645
0.837
GSPATT00004674001
M01665_2.00
Paramecium tetraurelia
NNATYHNN
NNDRATNN
PBM
Weirauch et al.(2014)
pTH5124
0.509
0.372
TTHERM_00243900
M01666_2.00
Tetrahymena thermophila
NDDATYANN
NNTRATHHN
PBM
Weirauch et al.(2014)
pTH5128
0.476
0.337
For this family, TFs with SR scores >
0.422
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CapteP64285
ARID/BRIGHT
29
115
KRREFLDDLFSFMQKRGTPVNRIPIMAKQTLDLYELFRLVVSKGGLVEVINKKLWREITKGLNLPSSITSAAFTLRTQYMKYLYPYE
Links
Other
ARID/BRIGHT
family TFs
Other
Capitella teleta
TFs
377 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMEG00000012079
Ailuropoda melanoleuca
ENSAMEG00000012079
N
0.000
ZNF367
Bos taurus
ENSBTAG00000006587
N
0.000
ZNF367
Callithrix jacchus
ENSCJAG00000012580
N
0.000
ZNF367
Canis familiaris
ENSCAFG00000001213
N
0.000
ZNF367
Cavia porcellus
ENSCPOG00000001515
N
0.000
ENSCSAG00000006700
Chlorocebus sabaeus
ENSCSAG00000006700
N
0.000
ZNF367
Choloepus hoffmanni
ENSCHOG00000008195
N
0.000
znf367
Danio rerio
ENSDARG00000021086
N
0.000
ZNF367
Dasypus novemcinctus
ENSDNOG00000035249
N
0.000
ENSDORG00000010750
Dipodomys ordii
ENSDORG00000010750
N
0.000
ENSECAG00000009173
Equus caballus
ENSECAG00000009173
N
0.000
ZNF367
Felis catus
ENSFCAG00000015587
N
0.000
ENSFALG00000003343
Ficedula albicollis
ENSFALG00000003343
N
0.000
ZNF367
Gallus gallus
ENSGALG00000012629
N
0.000
ZNF367
Gorilla gorilla
ENSGGOG00000012699
N
0.000
ZNF367
Homo sapiens
ENSG00000165244
N
0.000
ENSLACG00000011483
Latimeria chalumnae
ENSLACG00000011483
N
0.000
ENSLOCG00000009209
Lepisosteus oculatus
ENSLOCG00000009209
N
0.000
ZNF367
Macaca mulatta
ENSMMUG00000007996
N
0.000
ENSMEUG00000009287
Macropus eugenii
ENSMEUG00000009287
N
0.000
ZNF367
Meleagris gallopavo
ENSMGAG00000006781
N
0.000
ENSMICG00000002011
Microcebus murinus
ENSMICG00000002011
N
0.000
ZNF367
Monodelphis domestica
ENSMODG00000000499
N
0.000
ENSMPUG00000006868
Mustela putorius furo
ENSMPUG00000006868
N
0.000
ZNF367
Myotis lucifugus
ENSMLUG00000017279
N
0.000