DDB_G0275333 (Dictyostelium discoideum)
ARID/BRIGHT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01388 (ARID) IPR001606 DDB_G0275333 T014401_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DDB_G0275333
M01656_2.00		 Dictyostelium discoideum
NNATHDNNNN
NNNNHDATNN		 PBM
Weirauch et al.(2014)
pTH5168		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARID3A
M01658_2.00 		Microcebus murinus
NDATHAWDN
NHWTDATHN		 PBM
Weirauch et al.(2014)
pTH9214 		0.694 0.488
Arid3a
M00115_2.00 		Mus musculus
NDATHADDN
NHHTDATHN		 PBM
Badis et al.(2009)
Arid3a_3875 		0.694 0.488
Arid3a
M01660_2.00 		Mus musculus
NDATHAADN
NHTTDATHN		 PBM
Weirauch et al.(2014)
pTH5169 		0.694 0.488
Arid3a
M02651_2.00 		Mus musculus
ATYAAA
TTTRAT		 SELEX
Mathelier et al.(2014)
MA0151.1 		0.694 0.488
ARID3A
M09766_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DRI1_01 		0.694 0.488
ARID3A
M01662_2.00 		Procavia capensis
NNATHDNNN
NNNHDATNN		 PBM
Weirauch et al.(2014)
pTH9384 		0.694 0.477
Arid3b
M01659_2.00 		Mus musculus
NNDATTAAWWN
NWWTTAATHNN		 PBM
Weirauch et al.(2014)
pTH4425 		0.675 0.488
retn
M01664_2.00 		Drosophila melanogaster
NDATHRNN
NNYDATHN		 PBM
Weirauch et al.(2014)
pTH5119 		0.670 0.512
retn
M03590_2.00 		Drosophila melanogaster
NNATTRATHN
NDATYAATNN		 SELEX
Nitta et al.(2015)
retn_1 		0.670 0.512
retn
M05899_2.00 		Drosophila melanogaster
AATYAAAM
KTTTRATT		 B1H
Zhu et al.(2011)
retn_SANGER_5_FBgn0004795 		0.670 0.512
retn
M09768_2.00 		Drosophila melanogaster
NNRATTAADN
NHTTAATYNN		 Transfac
Matys et al.(2006)
I$DRI_01 		0.670 0.512
cfi-1
M01667_2.00 		Caenorhabditis elegans
NNATHDNN
NNHDATNN		 PBM
Weirauch et al.(2014)
pTH5118 		0.670 0.419
ACYPI009013
M01655_2.00 		Acyrthosiphon pisum
NDATHAADN
NHTTDATHN		 PBM
Weirauch et al.(2014)
pTH5117 		0.647 0.453
GSPATT00004674001
M01665_2.00 		Paramecium tetraurelia
NNATYHNN
NNDRATNN		 PBM
Weirauch et al.(2014)
pTH5124 		0.577 0.465
TTHERM_00243900
M01666_2.00 		Tetrahymena thermophila
NDDATYANN
NNTRATHHN		 PBM
Weirauch et al.(2014)
pTH5128 		0.545 0.384
For this family, TFs with SR scores > 0.422 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M01656_2.00 ARID/BRIGHT 20 106

DNA Binding Domains

Protein ID Domain From To Sequence
DDB0216390 ARID/BRIGHT 44 130

Links

Other ARID/BRIGHT family TFs
Other Dictyostelium discoideum TFs

368 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
nAv.1.0.1.g06936 Acanthocheilonema viteae nAv.1.0.1.g06936 I 0.000
ACYPI008586 Acyrthosiphon pisum ACYPI008586 I 0.000
AAEL003875 Aedes aegypti AAEL003875 I 0.000
ENSAMEG00000012479 Ailuropoda melanoleuca ENSAMEG00000012479 I 0.000
Alligator_sinensis_CCG005388.1 Alligator sinensis Alligator_sinensis_CCG005388.1 I 0.000
ENSAPLG00000007170 Anas platyrhynchos ENSAPLG00000007170 I 0.000
ANCCAN_00594 Ancylostoma caninum ANCCAN_00594 I 0.000
ANCCEY_05940 Ancylostoma ceylanicum ANCCEY_05940 I 0.000
ACOC_0001203801 Angiostrongylus costaricensis ACOC_0001203801 I 0.000
ASIM_0001129301 Anisakis simplex ASIM_0001129301 I 0.000
SP1 Anolis carolinensis ENSACAG00000000610 I 0.000
AALB008691 Anopheles albimanus AALB008691 I 0.000
AARA006360 Anopheles arabiensis AARA006360 I 0.000
AATE004178 Anopheles atroparvus AATE004178 I 0.000
ACHR002282 Anopheles christyi ACHR002282 I 0.000
ACUA022057 Anopheles culicifacies ACUA022057 I 0.000
ADAC004751 Anopheles darlingi ADAC004751 I 0.000
AFAF018385 Anopheles farauti AFAF018385 I 0.000
AFUN009419 Anopheles funestus AFUN009419 I 0.000
AGAP004438 Anopheles gambiae AGAP004438 I 0.000
AMAM018005 Anopheles maculatus AMAM018005 I 0.000
AMEM016115 Anopheles merus AMEM016115 I 0.000
AQUA008497 Anopheles quadriannulatus AQUA008497 I 0.000
ASIS011603 Anopheles sinensis ASIS011603 I 0.000
ASTEI04919 Anopheles stephensi ASTEI04919 I 0.000
ALUE_0000441701 Ascaris lumbricoides ALUE_0000441701 I 0.000
ASU_13052 Ascaris suum ASU_13052 I 0.000
BGLB011938 Biomphalaria glabrata BGLB011938 I 0.000
ENSBTAP00000003929-D1 Bos grunniens ENSBTAP00000003929-D1 I 0.000
SP1 Bos taurus ENSBTAG00000003021 I 0.000
Bm6499 Brugia malayi Bm6499 I 0.000
BTMF_0000199301 Brugia timori BTMF_0000199301 I 0.000
BXY_0564300 Bursaphelenchus xylophilus BXY_0564300 I 0.000
CBG20386 Caenorhabditis briggsae CBG20386 I 0.000
sptf-3 Caenorhabditis elegans WBGene00012735 D 0.000
CRE28577 Caenorhabditis remanei CRE28577 I 0.000
SP1 Callithrix jacchus ENSCJAG00000018553 I 0.000
Aan_R009568 Calypte anna Aan_R009568 I 0.000
Cflo_10237--XP_624316.2_APIME Camponotus floridanus Cflo_10237--XP_624316.2_APIME I 0.000
SP1 Canis familiaris ENSCAFG00000006950 I 0.000
CapteG112714 Capitella teleta CapteG112714 I 0.000
SP1 Cavia porcellus ENSCPOG00000023095 I 0.000
Cmyd_10006878 Chelonia mydas Cmyd_10006878 I 0.000
ENSCSAG00000005498 Chlorocebus sabaeus ENSCSAG00000005498 I 0.000
SP1 Choloepus hoffmanni ENSCHOG00000001703 I 0.000
CLEC006997 Cimex lectularius CLEC006997 I 0.000
CGI_10013026 Crassostrea gigas CGI_10013026 I 0.000
CpipJ_CPIJ003609 Culex pipiens CpipJ_CPIJ003609 I 0.000
CPIJ003609 Culex quinquefasciatus CPIJ003609 I 0.000
SP1 Dasypus novemcinctus ENSDNOG00000017346 I 0.000
DICVIV_09031 Dictyocaulus viviparus DICVIV_09031 I 0.000
nDi.2.2.2.g02202 Dirofilaria immitis nDi.2.2.2.g02202 I 0.000
DME_0000423301 Dracunculus medinensis DME_0000423301 I 0.000
EEL_0000517301 Elaeophora elaphi EEL_0000517301 I 0.000
EVEC_0000041101 Enterobius vermicularis EVEC_0000041101 I 0.000
ENSECAG00000020197 Equus caballus ENSECAG00000020197 I 0.000
SP1 Erinaceus europaeus ENSEEUG00000013568 I 0.000
SP1 Felis catus ENSFCAG00000030741 I 0.000
ENSGALG00000028401 Gallus gallus ENSGALG00000028401 I 0.000
Gfo_R005030 Geospiza fortis Gfo_R005030 I 0.000
GPLIN_000570600 Globodera pallida GPLIN_000570600 I 0.000
GPUH_0001030801 Gongylonema pulchrum GPUH_0001030801 I 0.000
SP1 Gorilla gorilla ENSGGOG00000012593 I 0.000
HCOI00688600 Haemonchus contortus HCOI00688600 I 0.000
HPLM_0000529101 Haemonchus placei HPLM_0000529101 I 0.000
HPBE_0001438901 Heligmosomoides bakeri HPBE_0001438901 I 0.000
SP1 Homo sapiens ENSG00000185591 D 0.000
ENSSTOG00000005928 Ictidomys tridecemlineatus ENSSTOG00000005928 I 0.000
LDEC008345 Leptinotarsa decemlineata LDEC008345 I 0.000
nLs.2.1.2.g07946 Litomosoides sigmodontis nLs.2.1.2.g07946 I 0.000
LOAG_01580 Loa loa LOAG_01580 I 0.000
SP1 Loxodonta africana ENSLAFG00000018043 I 0.000
LCUP000151 Lucilia cuprina LCUP000151 I 0.000
LLOJ008095 Lutzomyia longipalpis LLOJ008095 I 0.000
ENSMMUP00000026353 Macaca fascicularis ENSMMUP00000026353 I 0.000
SP1 Macaca mulatta ENSMMUG00000020036 I 0.000
ENSMEUG00000004493 Macropus eugenii ENSMEUG00000004493 I 0.000
augustus_masked-nMf.1.1.scaf01525-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf01525-processed-gene-0.0 I 0.000
MhA1_Contig599.frz3.gene7 Meloidogyne hapla MhA1_Contig599.frz3.gene7 I 0.000
Sp1 Mus musculus ENSMUSG00000001280 D 0.000
Myotis_brandtii_SP1_10022992 Myotis brandtii Myotis_brandtii_SP1_10022992 I 0.000
SP1 Myotis lucifugus ENSMLUG00000017303 I 0.000
NECAME_13378 Necator americanus NECAME_13378 I 0.000
NBR_0001206901 Nippostrongylus brasiliensis NBR_0001206901 I 0.000
ENSNLEG00000017699 Nomascus leucogenys ENSNLEG00000017699 I 0.000
SP1 Ochotona princeps ENSOPRG00000000691 I 0.000
nOo.2.0.1.g04030 Onchocerca ochengi nOo.2.0.1.g04030 I 0.000
nOo.2.0.1.g09582 Onchocerca ochengi nOo.2.0.1.g09582 I 0.000
WBGene00237583 Onchocerca volvulus WBGene00237583 I 0.000
WBGene00237584 Onchocerca volvulus WBGene00237584 I 0.000
Ogr16979 Ophisaurus gracilis Ogr16979 I 0.000
ENSONIG00000005121 Oreochromis niloticus ENSONIG00000005121 I 0.000
SP1 Oryctolagus cuniculus ENSOCUG00000004147 I 0.000
sp1 Oryzias latipes ENSORLG00000005195 I 0.000
ENSOARG00000016514 Ovis aries ENSOARG00000016514 I 0.000
SP1 Pan troglodytes ENSPTRG00000005014 I 0.000
ENSPANG00000018241 Papio anubis ENSPANG00000018241 I 0.000
ENSPSIG00000007013 Pelodiscus sinensis ENSPSIG00000007013 I 0.000
ENSPMAG00000000389 Petromyzon marinus ENSPMAG00000000389 I 0.000
ENSPFOG00000007682 Poecilia formosa ENSPFOG00000007682 I 0.000
Pvit_07435 Pogona vitticeps Pvit_07435 I 0.000
ENSPPYG00000004579 Pongo abelii ENSPPYG00000004579 I 0.000
SP1 Procavia capensis ENSPCAG00000004934 I 0.000
SP1 Pteropus vampyrus ENSPVAG00000012280 I 0.000
Sp1 Rattus norvegicus ENSRNOG00000014084 I 0.000
RSKR_0000732300 Rhabditophanes kr3021 RSKR_0000732300 I 0.000
RSKR_0000732400 Rhabditophanes kr3021 RSKR_0000732400 I 0.000
SBAD_0000755901 Soboliphyme baturini SBAD_0000755901 I 0.000
SP1 Sorex araneus ENSSARG00000013480 I 0.000
L596_g19604 Steinernema carpocapsae L596_g19604 I 0.000
L889_g32073 Steinernema feltiae L889_g32073 I 0.000
L893_g2044 Steinernema glaseri L893_g2044 I 0.000
L898_g7955 Steinernema monticolum L898_g7955 I 0.000
L892_g17070 Steinernema scapterisci L892_g17070 I 0.000
SMAR004952 Strigamia maritima SMAR004952 I 0.000
SPU_009831 Strongylocentrotus purpuratus SPU_009831 I 0.000
SPU_009832 Strongylocentrotus purpuratus SPU_009832 I 0.000
SP1 Sus scrofa ENSSSCG00000000272 I 0.000
SMUV_0000007001 Syphacia muris SMUV_0000007001 I 0.000
SP1 Taeniopygia guttata ENSTGUG00000015642 I 0.000
sp1 Takifugu rubripes ENSTRUG00000014305 I 0.000
ENSTSYG00000001068 Tarsius syrichta ENSTSYG00000001068 I 0.000
sp1 Tetraodon nigroviridis ENSTNIG00000007066 I 0.000
D917_06327 Trichinella nativa D917_06327 I 0.000
EFV52785 Trichinella spiralis EFV52785 I 0.000
SP1 Tupaia belangeri ENSTBEG00000010202 I 0.000
SP1 Tursiops truncatus ENSTTRG00000009591 I 0.000
ENSXMAG00000017829 Xiphophorus maculatus ENSXMAG00000017829 I 0.000