ENSORLG00000017354 (Oryzias latipes)
ARID/BRIGHT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01388 (ARID) IPR001606 ENSORLG00000017354 T014699_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Arid3b
M01659_2.00 		Mus musculus
NNDATTAAWWN
NWWTTAATHNN		 PBM
Weirauch et al.(2014)
pTH4425 		0.741 0.919
ARID3A
M01658_2.00 		Microcebus murinus
NDATHAWDN
NHWTDATHN		 PBM
Weirauch et al.(2014)
pTH9214 		0.739 0.953
Arid3a
M00115_2.00 		Mus musculus
NDATHADDN
NHHTDATHN		 PBM
Badis et al.(2009)
Arid3a_3875 		0.739 0.953
Arid3a
M01660_2.00 		Mus musculus
NDATHAADN
NHTTDATHN		 PBM
Weirauch et al.(2014)
pTH5169 		0.739 0.953
Arid3a
M02651_2.00 		Mus musculus
ATYAAA
TTTRAT		 SELEX
Mathelier et al.(2014)
MA0151.1 		0.739 0.953
ARID3A
M09766_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DRI1_01 		0.739 0.953
ARID3A
M01662_2.00 		Procavia capensis
NNATHDNNN
NNNHDATNN		 PBM
Weirauch et al.(2014)
pTH9384 		0.739 0.942
cfi-1
M01667_2.00 		Caenorhabditis elegans
NNATHDNN
NNHDATNN		 PBM
Weirauch et al.(2014)
pTH5118 		0.701 0.791
retn
M01664_2.00 		Drosophila melanogaster
NDATHRNN
NNYDATHN		 PBM
Weirauch et al.(2014)
pTH5119 		0.687 0.826
retn
M03590_2.00 		Drosophila melanogaster
NNATTRATHN
NDATYAATNN		 SELEX
Nitta et al.(2015)
retn_1 		0.687 0.826
retn
M05899_2.00 		Drosophila melanogaster
AATYAAAM
KTTTRATT		 B1H
Zhu et al.(2011)
retn_SANGER_5_FBgn0004795 		0.687 0.826
retn
M09768_2.00 		Drosophila melanogaster
NNRATTAADN
NHTTAATYNN		 Transfac
Matys et al.(2006)
I$DRI_01 		0.687 0.826
DDB_G0275333
M01656_2.00 		Dictyostelium discoideum
NNATHDNNNN
NNNNHDATNN		 PBM
Weirauch et al.(2014)
pTH5168 		0.675 0.488
ACYPI009013
M01655_2.00 		Acyrthosiphon pisum
NDATHAADN
NHTTDATHN		 PBM
Weirauch et al.(2014)
pTH5117 		0.664 0.698
GSPATT00004674001
M01665_2.00 		Paramecium tetraurelia
NNATYHNN
NNDRATNN		 PBM
Weirauch et al.(2014)
pTH5124 		0.508 0.407
TTHERM_00243900
M01666_2.00 		Tetrahymena thermophila
NDDATYANN
NNTRATHHN		 PBM
Weirauch et al.(2014)
pTH5128 		0.508 0.372
For this family, TFs with SR scores > 0.422 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSORLP00000021704 ARID/BRIGHT 10 96

Links

Other ARID/BRIGHT family TFs
Other Oryzias latipes TFs

366 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ANCCAN_19748 Ancylostoma caninum ANCCAN_19748 N 0.000
ANCCAN_17994 Ancylostoma caninum ANCCAN_17994 N 0.000
ANCCAN_02907 Ancylostoma caninum ANCCAN_02907 N 0.000
ENSACAG00000011860 Anolis carolinensis ENSACAG00000011860 N 0.000
AALB000417 Anopheles albimanus AALB000417 N 0.000
AATE002453 Anopheles atroparvus AATE002453 N 0.000
AATE020165 Anopheles atroparvus AATE020165 N 0.000
ACHR005918 Anopheles christyi ACHR005918 N 0.000
ADAC010198 Anopheles darlingi ADAC010198 N 0.000
ADIR010892 Anopheles dirus ADIR010892 N 0.000
AEPI001845 Anopheles epiroticus AEPI001845 N 0.000
AEPI001841 Anopheles epiroticus AEPI001841 N 0.000
AMEC018160 Anopheles melas AMEC018160 N 0.000
AMEM005938 Anopheles merus AMEM005938 N 0.000
Bm6032 Brugia malayi Bm6032 N 0.000
BTMF_0001483201 Brugia timori BTMF_0001483201 N 0.000
Brh_R005675 Buceros rhinoceros Brh_R005675 N 0.000
CJA37253 Caenorhabditis japonica CJA37253 N 0.000
CRE02357 Caenorhabditis remanei CRE02357 N 0.000
TBR1 Callithrix jacchus ENSCJAG00000005603 I 0.000
Cflo_07689--XP_001122560.1_APIME Camponotus floridanus Cflo_07689--XP_001122560.1_APIME N 0.000
CLEC007098 Cimex lectularius CLEC007098 N 0.000
CpipJ_CPIJ000433 Culex pipiens CpipJ_CPIJ000433 N 0.000
CPIJ000433 Culex quinquefasciatus CPIJ000433 N 0.000
ENSECAG00000018160 Equus caballus ENSECAG00000018160 N 0.000
Gfo_R006963 Geospiza fortis Gfo_R006963 N 0.000
HelroG89689 Helobdella robusta HelroG89689 N 0.000
TBR1 Homo sapiens ENSG00000136535 D 0.000
nLs.2.1.2.g03773 Litomosoides sigmodontis nLs.2.1.2.g03773 N 0.000
T Mus musculus ENSMUSG00000062327 D 0.000
Tbr1 Mus musculus ENSMUSG00000035033 D 0.000
NBR_0001696801 Nippostrongylus brasiliensis NBR_0001696801 N 0.000
ENSOANG00000028644 Ornithorhynchus anatinus ENSOANG00000028644 N 0.000
scaffold432-EXSNAP2012.9 Pristionchus exspectatus scaffold432-EXSNAP2012.9 N 0.000
PPA25262 Pristionchus pacificus PPA25262 N 0.000
Sakowv30001714m.g Saccoglossus kowalevskii Sakowv30001714m.g I 0.000
ENSTGUG00000006709 Taeniopygia guttata ENSTGUG00000006709 N 0.000
ENSTRUG00000007811 Takifugu rubripes ENSTRUG00000007811 N 0.000
ENSTSYG00000004047 Tarsius syrichta ENSTSYG00000004047 N 0.000
TCLT_0000808101 Thelazia callipaeda TCLT_0000808101 N 0.000
WUBG_08467 Wuchereria bancrofti WUBG_08467 N 0.000