MTR_5g024920 (Medicago truncatula)
ARID/BRIGHT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01388 (ARID) IPR001606 MTR_5g024920 T015273_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARID3
M06695_2.00 		Arabidopsis thaliana
AAWWHNAAATYAAWW
WWTTRATTTNDWWTT		 Dap-seq
OMalley et al.(2016)
AT2G17410_col_a 		0.667 0.847
ARID6
M06694_2.00 		Arabidopsis thaliana
HAATTRAWTTN
NAAWTYAATTD		 Dap-seq
OMalley et al.(2016)
AT1G20910_col_a 		0.615 0.706
For this family, TFs with SR scores > 0.422 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AES95384 ARID/BRIGHT 312 397
KEH27637 ARID/BRIGHT 387 472

Links

Other ARID/BRIGHT family TFs
Other Medicago truncatula TFs

154 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
nAv.1.0.1.g00338 Acanthocheilonema viteae nAv.1.0.1.g00338 N 0.000
AAEL017280 Aedes aegypti AAEL017280 N 0.000
ANCCAN_09492 Ancylostoma caninum ANCCAN_09492 N 0.000
ANCCEY_03110 Ancylostoma ceylanicum ANCCEY_03110 N 0.000
ANCDUO_04788 Ancylostoma duodenale ANCDUO_04788 N 0.000
AFAF010393 Anopheles farauti AFAF010393 N 0.000
AFUN009891 Anopheles funestus AFUN009891 N 0.000
AMEM013442 Anopheles merus AMEM013442 N 0.000
ASTEI11512 Anopheles stephensi ASTEI11512 N 0.000
GB44899 Apis mellifera GB44899 N 0.000
ACEP26642 Atta cephalotes ACEP26642 N 0.000
BGIBMGA010273 Bombyx mori BGIBMGA010273 N 0.000
Bm1891 Brugia malayi Bm1891 N 0.000
BTMF_0001195401 Brugia timori BTMF_0001195401 N 0.000
BXY_0663500 Bursaphelenchus xylophilus BXY_0663500 N 0.000
CBN07938 Caenorhabditis brenneri CBN07938 N 0.000
CBG12337 Caenorhabditis briggsae CBG12337 N 0.000
let-526 Caenorhabditis elegans WBGene00002717 N 0.000
CJA11729 Caenorhabditis japonica CJA11729 N 0.000
CRE29533 Caenorhabditis remanei CRE29533 N 0.000
Cflo_01219--XP_395512.3_APIME Camponotus floridanus Cflo_01219--XP_395512.3_APIME N 0.000
CLEC012210 Cimex lectularius CLEC012210 N 0.000
KGM_12579 Danaus plexippus KGM_12579 N 0.000
YQE_09239 Dendroctonus ponderosae YQE_09239 N 0.000
nDi.2.2.2.g04479 Dirofilaria immitis nDi.2.2.2.g04479 N 0.000
DME_0001005001 Dracunculus medinensis DME_0001005001 N 0.000
GF23141 Drosophila ananassae FBgn0100135 N 0.000
GG16758 Drosophila erecta FBgn0108988 N 0.000
GH15872 Drosophila grimshawi FBgn0123343 N 0.000
osa Drosophila melanogaster FBgn0261885 N 0.000
GI23637 Drosophila mojavensis FBgn0146363 N 0.000
GA26236 Drosophila pseudoobscura FBgn0247610 N 0.000
GM15347 Drosophila sechellia FBgn0170267 N 0.000
GJ24712 Drosophila virilis FBgn0211788 N 0.000
GK22507 Drosophila willistoni FBgn0224484 N 0.000
osa Drosophila yakuba FBgn0041640 N 0.000
EEL_0001008901 Elaeophora elaphi EEL_0001008901 N 0.000
EVEC_0000024601 Enterobius vermicularis EVEC_0000024601 N 0.000
GPLIN_000077900 Globodera pallida GPLIN_000077900 N 0.000
GPUH_0000112301 Gongylonema pulchrum GPUH_0000112301 N 0.000
HCOI00324200 Haemonchus contortus HCOI00324200 N 0.000
HPLM_0000291901 Haemonchus placei HPLM_0000291901 N 0.000
HHAL005964-PA Halyomorpha halys HHAL005964-PA N 0.000
Hsal_01939--XP_395512.3_APIME Harpegnathos saltator Hsal_01939--XP_395512.3_APIME N 0.000
HPBE_0000983501 Heligmosomoides bakeri HPBE_0000983501 N 0.000
ISCW014189 Ixodes scapularis ISCW014189 I 0.000
LDEC011073 Leptinotarsa decemlineata LDEC011073 I 0.000
nLs.2.1.2.g09434 Litomosoides sigmodontis nLs.2.1.2.g09434 N 0.000
LOAG_17326 Loa loa LOAG_17326 N 0.000
LCUP015823 Lucilia cuprina LCUP015823 N 0.000
augustus_masked-nMf.1.1.scaf10960-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf10960-processed-gene-0.0 I 0.000
MhA1_Contig163.frz3.gene26 Meloidogyne hapla MhA1_Contig163.frz3.gene26 I 0.000
NECAME_01002 Necator americanus NECAME_01002 N 0.000
NBR_0002081701 Nippostrongylus brasiliensis NBR_0002081701 N 0.000
OESDEN_04600 Oesophagostomum dentatum OESDEN_04600 N 0.000
OFLC_0001383401 Onchocerca flexuosa OFLC_0001383401 N 0.000
nOo.2.0.1.g08403 Onchocerca ochengi nOo.2.0.1.g08403 N 0.000
WBGene00237224 Onchocerca volvulus WBGene00237224 N 0.000
PEQ_0000742201 Parascaris equorum PEQ_0000742201 N 0.000
PTRK_0001699800 Parastrongyloides trichosuri PTRK_0001699800 N 0.000
PHUM080380 Pediculus humanus PHUM080380 N 0.000
PPAI002183 Phlebotomus papatasi PPAI002183 N 0.000
scaffold2015-EXSNAP2012.2 Pristionchus exspectatus scaffold2015-EXSNAP2012.2 N 0.000
PPA05721 Pristionchus pacificus PPA05721 N 0.000
RSKR_0000271300 Rhabditophanes kr3021 RSKR_0000271300 N 0.000
SBAD_0000668001 Soboliphyme baturini SBAD_0000668001 N 0.000
SINV22763 Solenopsis invicta SINV22763 N 0.000
L596_g4117 Steinernema carpocapsae L596_g4117 N 0.000
L889_g180 Steinernema feltiae L889_g180 N 0.000
L893_g29191 Steinernema glaseri L893_g29191 N 0.000
L898_g7337 Steinernema monticolum L898_g7337 N 0.000
L892_g19705 Steinernema scapterisci L892_g19705 N 0.000
SMAR003184 Strigamia maritima SMAR003184 I 0.000
SMAR006121 Strigamia maritima SMAR006121 I 0.000
SPAL_0001124500 Strongyloides papillosus SPAL_0001124500 N 0.000
SSTP_0000977600 Strongyloides stercoralis SSTP_0000977600 N 0.000
SVE_1830100 Strongyloides venezuelensis SVE_1830100 N 0.000
TELCIR_03263 Teladorsagia circumcincta TELCIR_03263 N 0.000
TCLT_0000619901 Thelazia callipaeda TCLT_0000619901 N 0.000
TC013586 Tribolium castaneum TC013586 N 0.000
D917_06367 Trichinella nativa D917_06367 N 0.000
EFV52694 Trichinella spiralis EFV52694 N 0.000
TMUE_s0224000200 Trichuris muris TMUE_s0224000200 N 0.000
D918_04368 Trichuris suis D918_04368 N 0.000
WUBG_00477 Wuchereria bancrofti WUBG_00477 N 0.000