CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OGLUM06G29760
(
Oryza glumaepatula
)
ARID/BRIGHT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01388 (ARID)
IPR001606
OGLUM06G29760
T015331_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OGLUM06G29760.1
ARID/BRIGHT
88
181
DPDTFLLDYRRFLHRHRGRKKPKPKLPALSDGRPLDLCRLFHAVKRFGGYDGACAGKRWADVLRLVDDKAPRHASSVSEHVIAQLYYEHLYQYE
OGLUM06G29760.2
ARID/BRIGHT
88
181
DPDTFLLDYRRFLHRHRGRKKPKPKLPALSDGRPLDLCRLFHAVKRFGGYDGACAGKRWADVLRLVDDKAPRHASSVSEHVIAQLYYEHLYQYE
Links
Other
ARID/BRIGHT
family TFs
Other
Oryza glumaepatula
TFs
21 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aquca_038_00045
Aquilegia coerulea
Aquca_038_00045
N
0.424
BRADI1G29247
Brachypodium distachyon
BRADI1G29247
N
0.572
Cla011637
Citrullus lanatus
Cla011637
N
0.433
LPERR06G23820
Leersia perrieri
LPERR06G23820
N
0.663
OBART06G28370
Oryza barthii
OBART06G28370
N
0.785
OB06G36110
Oryza brachyantha
OB06G36110
N
0.631
ORGLA06G0289500
Oryza glaberrima
ORGLA06G0289500
N
0.785
BGIOSGA020494
Oryza indica
BGIOSGA020494
N
0.785
OLONG_013925
Oryza longistaminata
OLONG_013925
N
0.762
OMERI06G28260
Oryza meridionalis
OMERI06G28260
N
0.785
ONIVA06G31490
Oryza nivara
ONIVA06G31490
N
0.785
OPUNC06G25880
Oryza punctata
OPUNC06G25880
N
0.678
ORUFI06G30290
Oryza rufipogon
ORUFI06G30290
N
0.785
OS06G0731600
Oryza sativa
OS06G0731600
N
0.785
Pavir.Ib01650
Panicum virgatum
Pavir.Ib01650
N
0.448
PDK_20s1401711g002
Phoenix dactylifera
PDK_20s1401711g002
N
0.434
30190.m011218
Ricinus communis
30190.m011218
N
0.453
Si005667m.g
Setaria italica
Si005667m.g
N
0.537
Sb10g031260
Sorghum bicolor
Sb10g031260
N
0.610
GRMZM2G466292
Zea mays
GRMZM2G466292
N
0.588