TCM_000019 (Theobroma cacao)
ARID/BRIGHT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01388 (ARID) IPR001606 TCM_000019 T015682_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARID3
M06695_2.00 		Arabidopsis thaliana
AAWWHNAAATYAAWW
WWTTRATTTNDWWTT		 Dap-seq
OMalley et al.(2016)
AT2G17410_col_a 		0.445 0.711
For this family, TFs with SR scores > 0.422 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EOX90591 ARID/BRIGHT 242 321

Links

Other ARID/BRIGHT family TFs
Other Theobroma cacao TFs

64 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
DPBF2 Arabidopsis thaliana AT3G44460 I 0.000
Bostr.0556s0737 Boechera stricta Bostr.0556s0737 I 0.000
BRADI2G55550 Brachypodium distachyon BRADI2G55550 I 0.000
Bo3g122120 Brassica oleracea Bo3g122120 I 0.000
Bra019436 Brassica rapa Bra019436 I 0.000
PK24205.1 Cannabis sativa PK24205.1 D 0.000
Cagra.2192s0012 Capsella grandiflora Cagra.2192s0012 I 0.000
Carubv10019243m.g Capsella rubella Carubv10019243m.g I 0.000
Thhalv10011159m.g Eutrema salsugineum Thhalv10011159m.g I 0.000
Gorai.013G258300 Gossypium raimondii Gorai.013G258300 I 0.000
cassava16074.m1 Manihot esculenta cassava16074.m1 I 0.000
MTR_6g026800 Medicago truncatula MTR_6g026800 I 0.000
POPTR_0009s16610 Populus trichocarpa POPTR_0009s16610 I 0.000
30055.m001548 Ricinus communis 30055.m001548 I 0.000
SapurV1A.0374s0070 Salix purpurea SapurV1A.0374s0070 I 0.000