Traes_6AL_D304A3C3B (Triticum aestivum)
ARID/BRIGHT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01388 (ARID) IPR001606 Traes_6AL_D304A3C3B T015722_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARID3
M06695_2.00 		Arabidopsis thaliana
AAWWHNAAATYAAWW
WWTTRATTTNDWWTT		 Dap-seq
OMalley et al.(2016)
AT2G17410_col_a 		0.704 0.753
ARID6
M06694_2.00 		Arabidopsis thaliana
HAATTRAWTTN
NAAWTYAATTD		 Dap-seq
OMalley et al.(2016)
AT1G20910_col_a 		0.609 0.718
For this family, TFs with SR scores > 0.422 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Traes_6AL_D304A3C3B.1 ARID/BRIGHT 26 111

Links

Other ARID/BRIGHT family TFs
Other Triticum aestivum TFs

154 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
fgenesh2_kg.5__89__AT2G01818.1 Arabidopsis lyrata fgenesh2_kg.5__89__AT2G01818.1 I 0.000
Bostr.0556s0005 Boechera stricta Bostr.0556s0005 I 0.000
Bo7g078820 Brassica oleracea Bo7g078820 I 0.000
Bo2g134600 Brassica oleracea Bo2g134600 I 0.000
PK02661.1 Cannabis sativa PK02661.1 I 0.000
Cagra.2235s0037 Capsella grandiflora Cagra.2235s0037 I 0.000
Carubv10017978m.g Capsella rubella Carubv10017978m.g I 0.000
evm.TU.supercontig_2.160 Carica papaya evm.TU.supercontig_2.160 I 0.000
Cla005897 Citrullus lanatus Cla005897 N 0.000
Ciclev10016611m.g Citrus clementina Ciclev10016611m.g N 0.000
Cucsa.012070 Cucumis sativus Cucsa.012070 N 0.000
Eucgr.G02080 Eucalyptus grandis Eucgr.G02080 I 0.000
Thhalv10005480m.g Eutrema salsugineum Thhalv10005480m.g I 0.000
Gorai.013G029900 Gossypium raimondii Gorai.013G029900 I 0.000
Gorai.008G170500 Gossypium raimondii Gorai.008G170500 I 0.000
Gorai.005G152700 Gossypium raimondii Gorai.005G152700 I 0.000
Lus10030763.g Linum usitatissimum Lus10030763.g I 0.000
Lus10013242.g Linum usitatissimum Lus10013242.g I 0.000
MDP0000290118 Malus domestica MDP0000290118 I 0.000
cassava20325.m1 Manihot esculenta cassava20325.m1 I 0.000
cassava40347.m1 Manihot esculenta cassava40347.m1 N 0.000
mgf026615m Mimulus guttatus mgf026615m N 0.000
POPTR_0008s13660 Populus trichocarpa POPTR_0008s13660 I 0.000
POPTR_0010s11410 Populus trichocarpa POPTR_0010s11410 I 0.000
Pm005894 Prunus mume Pm005894 I 0.000
PRUPE_ppa011075mg Prunus persica PRUPE_ppa011075mg I 0.000
29968.m000644 Ricinus communis 29968.m000644 I 0.000
SapurV1A.0015s0650 Salix purpurea SapurV1A.0015s0650 I 0.000
SapurV1A.0055s0220 Salix purpurea SapurV1A.0055s0220 I 0.000
TCM_011266 Theobroma cacao TCM_011266 I 0.000
VIT_01s0011g06060 Vitis vinifera VIT_01s0011g06060 N 0.000