Ca_04797 (Cicer arietinum)
ARID/BRIGHT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01388 (ARID) IPR001606 Ca_04797 T015862_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARID3
M06695_2.00 		Arabidopsis thaliana
AAWWHNAAATYAAWW
WWTTRATTTNDWWTT		 Dap-seq
OMalley et al.(2016)
AT2G17410_col_a 		0.681 0.824
ARID6
M06694_2.00 		Arabidopsis thaliana
HAATTRAWTTN
NAAWTYAATTD		 Dap-seq
OMalley et al.(2016)
AT1G20910_col_a 		0.672 0.776
For this family, TFs with SR scores > 0.422 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ca_04797 ARID/BRIGHT 103 188

Links

Other ARID/BRIGHT family TFs
Other Cicer arietinum TFs

153 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ANAC13 Arabidopsis lyrata fgenesh2_kg.1__3425__AT1G32870.2 I 0.000
ANAC13 Arabidopsis thaliana AT1G32870 D 0.000
Bostr.3359s0074 Boechera stricta Bostr.3359s0074 I 0.000
Bo7g057730 Brassica oleracea Bo7g057730 I 0.000
Cagra.1443s0015 Capsella grandiflora Cagra.1443s0015 I 0.000
Carubv10008817m.g Capsella rubella Carubv10008817m.g I 0.000
Thhalv10007369m.g Eutrema salsugineum Thhalv10007369m.g I 0.000
POPTR_0002s06210 Populus trichocarpa POPTR_0002s06210 I 0.000
POPTR_0005s22180 Populus trichocarpa POPTR_0005s22180 I 0.000
SapurV1A.0134s0420 Salix purpurea SapurV1A.0134s0420 I 0.000
Solyc04g072220.2 Solanum lycopersicum Solyc04g072220.2 I 0.000
PGSC0003DMG400031149 Solanum tuberosum PGSC0003DMG400031149 I 0.000