evm.TU.supercontig_26.2 (Carica papaya)
ARID/BRIGHT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01388 (ARID) IPR001606 evm.TU.supercontig_26.2 T016105_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARID3
M06695_2.00 		Arabidopsis thaliana
AAWWHNAAATYAAWW
WWTTRATTTNDWWTT		 Dap-seq
OMalley et al.(2016)
AT2G17410_col_a 		0.667 0.776
ARID6
M06694_2.00 		Arabidopsis thaliana
HAATTRAWTTN
NAAWTYAATTD		 Dap-seq
OMalley et al.(2016)
AT1G20910_col_a 		0.659 0.788
For this family, TFs with SR scores > 0.422 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
evm.model.supercontig_26.2 ARID/BRIGHT 155 240

Links

Other ARID/BRIGHT family TFs
Other Carica papaya TFs

153 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSBTAP00000012908-D1 Bos grunniens ENSBTAP00000012908-D1 N 0.000
ENSBTAG00000026286 Bos taurus ENSBTAG00000026286 N 0.000
ENSCAFG00000011367 Canis familiaris ENSCAFG00000011367 N 0.000
ENSCPOG00000022638 Cavia porcellus ENSCPOG00000022638 N 0.000
ENSCSAG00000018260 Chlorocebus sabaeus ENSCSAG00000018260 N 0.000
ENSDNOG00000043641 Dasypus novemcinctus ENSDNOG00000043641 N 0.000
ENSDNOG00000046682 Dasypus novemcinctus ENSDNOG00000046682 N 0.000
ENSECAG00000021592 Equus caballus ENSECAG00000021592 N 0.000
GTF2IRD2B Homo sapiens ENSG00000174428 N 0.000
GTF2IRD2 Homo sapiens ENSG00000196275 N 0.000
ENSLAFG00000013081 Loxodonta africana ENSLAFG00000013081 N 0.000
ENSP00000393677 Macaca fascicularis ENSP00000393677 N 0.000
ENSMMUG00000017270 Macaca mulatta ENSMMUG00000017270 N 0.000
ENSMPUG00000016180 Mustela putorius furo ENSMPUG00000016180 N 0.000
Gtf2ird2 Mus musculus ENSMUSG00000015942 N 0.000
Myotis_brandtii_GTF2IRD2_10014292 Myotis brandtii Myotis_brandtii_GTF2IRD2_10014292 N 0.000
ENSMLUG00000024497 Myotis lucifugus ENSMLUG00000024497 N 0.000
ENSOCUG00000022131 Oryctolagus cuniculus ENSOCUG00000022131 N 0.000
ENSOGAG00000000844 Otolemur garnettii ENSOGAG00000000844 N 0.000
ENSOARG00000010976 Ovis aries ENSOARG00000010976 N 0.000
ENSPTRG00000019295 Pan troglodytes ENSPTRG00000019295 N 0.000
ENSPANG00000018076 Papio anubis ENSPANG00000018076 N 0.000
ENSPPYG00000017480 Pongo abelii ENSPPYG00000017480 N 0.000
ENSPVAG00000005368 Pteropus vampyrus ENSPVAG00000005368 N 0.000
ENSSSCG00000028635 Sus scrofa ENSSSCG00000028635 N 0.000
gtf2i Xenopus tropicalis XB-GENE-1217437 N 0.000