CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLYMA12G05250
(
Glycine max
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02362 (B3)
IPR003340
GLYMA12G05250
T019300_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GLYMA12G05250.1
B3
6
98
FHKLLLPSTVQPNQQLRLPDNFMRKYGGELLPIVTLSVPDGSVWRVGLKKADNKYWFLDGWKEFVKHYSISIGYLLVFKYEGKSSFSVHIFNL
GLYMA12G05250.1
B3
302
397
CRVVLRPSYLYRGCIMYLPSCFAEKHLNGVSGFIKLQISNGRQWPVRCLYRGGRAKLSQGWFEFSLENNLGEGDVCVFELLRMKEVVLQVTVFRVI
GLYMA12G05250.2
B3
6
98
FHKLLLPSTVQPNQQLRLPDNFMRKYGGELLPIVTLSVPDGSVWRVGLKKADNKYWFLDGWKEFVKHYSISIGYLLVFKYEGKSSFSVHIFNL
GLYMA12G05250.2
B3
297
392
CRVVLRPSYLYRGCIMYLPSCFAEKHLNGVSGFIKLQISNGRQWPVRCLYRGGRAKLSQGWFEFSLENNLGEGDVCVFELLRMKEVVLQVTVFRVI
GLYMA12G05250.3
B3
6
98
FHKLLLPSTVQPNQQLRLPDNFMRKYGGELLPIVTLSVPDGSVWRVGLKKADNKYWFLDGWKEFVKHYSISIGYLLVFKYEGKSSFSVHIFNL
GLYMA12G05250.4
B3
6
98
FHKLLLPSTVQPNQQLRLPDNFMRKYGGELLPIVTLSVPDGSVWRVGLKKADNKYWFLDGWKEFVKHYSISIGYLLVFKYEGKSSFSVHIFNL
Links
Other
B3
family TFs
Other
Glycine max
TFs
17 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PK10791.1
Cannabis sativa
PK10791.1
I
0.720
Ca_14825
Cicer arietinum
Ca_14825
N
0.783
Ca_13671
Cicer arietinum
Ca_13671
N
0.857
GLYMA11G13210
Glycine max
GLYMA11G13210
N
0.931
GLYMA20G01130
Glycine max
GLYMA20G01130
N
0.783
GLYMA07G21160
Glycine max
GLYMA07G21160
I
0.778
Gorai.005G240900
Gossypium raimondii
Gorai.005G240900
I
0.709
chr2.CM0262.200.nc
Lotus japonicus
chr2.CM0262.200.nc
I
0.757
chr2.CM0308.470.nd
Lotus japonicus
chr2.CM0308.470.nd
I
0.746
chr3.LjT23H01.130.nc
Lotus japonicus
chr3.LjT23H01.130.nc
N
0.831
MTR_1g034240
Medicago truncatula
MTR_1g034240
N
0.778
MTR_4g068320
Medicago truncatula
MTR_4g068320
N
0.825
Pm021537
Prunus mume
Pm021537
N
0.709
PRUPE_ppa006275mg
Prunus persica
PRUPE_ppa006275mg
I
0.741
29851.m002498
Ricinus communis
29851.m002498
I
0.704
TCM_006971
Theobroma cacao
TCM_006971
I
0.714