POPTR_0002s02630 (Populus trichocarpa)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02362 (B3) IPR003340 POPTR_0002s02630 T020804_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARF5
M06701_2.00 		Arabidopsis thaliana
WYTTGTCGGN
NCCGACAARW		 Dap-seq
OMalley et al.(2016)
MP_col 		0.867 0.867
ARF8
M01697_2.00 		Arabidopsis thaliana
NHTGTCGGN
NCCGACADN		 PBM
Weirauch et al.(2014)
pTH8661 		0.776 0.776
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0002s02630.1 B3 147 249

Links

Other B3 family TFs
Other Populus trichocarpa TFs

509 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
nAv.1.0.1.g05236 Acanthocheilonema viteae nAv.1.0.1.g05236 I
ACYPI52155 Acyrthosiphon pisum ACYPI52155 I
ENSAMEG00000010127 Ailuropoda melanoleuca ENSAMEG00000010127 I
ENSAMEG00000010662 Ailuropoda melanoleuca ENSAMEG00000010662 I
Alligator_sinensis_CCG006492.1 Alligator sinensis Alligator_sinensis_CCG006492.1 I
Alligator_sinensis_CCG013279.1 Alligator sinensis Alligator_sinensis_CCG013279.1 I
ANCCAN_00243 Ancylostoma caninum ANCCAN_00243 I
ANCDUO_03668 Ancylostoma duodenale ANCDUO_03668 N
ACAC_0000893101 Angiostrongylus cantonensis ACAC_0000893101 I
ACAC_0001290301 Angiostrongylus cantonensis ACAC_0001290301 I
ACOC_0000178201 Angiostrongylus costaricensis ACOC_0000178201 I
ENSACAG00000011033 Anolis carolinensis ENSACAG00000011033 I
PAX5 Anolis carolinensis ENSACAG00000011646 I
AALB001179 Anopheles albimanus AALB001179 I
AARA010781 Anopheles arabiensis AARA010781 I
AATE014886 Anopheles atroparvus AATE014886 I
ACHR009211 Anopheles christyi ACHR009211 I
ACHR009800 Anopheles christyi ACHR009800 I
ACOM039288 Anopheles coluzzii ACOM039288 I
ACUA016445 Anopheles culicifacies ACUA016445 I
ACUA027429 Anopheles culicifacies ACUA027429 I
ADIR000964 Anopheles dirus ADIR000964 I
ADIR011362 Anopheles dirus ADIR011362 I
AEPI004837 Anopheles epiroticus AEPI004837 I
AFAF002012 Anopheles farauti AFAF002012 I
AFUN002668 Anopheles funestus AFUN002668 I
AFUN011579 Anopheles funestus AFUN011579 I
AGAP000057 Anopheles gambiae AGAP000057 I
AGAP008818 Anopheles gambiae AGAP008818 I
AMAM005900 Anopheles maculatus AMAM005900 I
AMEC005358 Anopheles melas AMEC005358 I
AMEC016969 Anopheles melas AMEC016969 I
AMEM003247 Anopheles merus AMEM003247 I
AMEM011238 Anopheles merus AMEM011238 I
AMIN002123 Anopheles minimus AMIN002123 I
AQUA004184 Anopheles quadriannulatus AQUA004184 I
ASIS007673 Anopheles sinensis ASIS007673 I
GB53602 Apis mellifera GB53602 I
Afo_R005136 Aptenodytes forsteri Afo_R005136 I
ALUE_0000749601 Ascaris lumbricoides ALUE_0000749601 N
ALUE_0001419501 Ascaris lumbricoides ALUE_0001419501 I
ASU_03705 Ascaris suum ASU_03705 I
ASU_08112 Ascaris suum ASU_08112 N
ENSAMXG00000005158 Astyanax mexicanus ENSAMXG00000005158 I
ENSAMXG00000009227 Astyanax mexicanus ENSAMXG00000009227 I
ACEP12359 Atta cephalotes ACEP12359 I
BGLB002028 Biomphalaria glabrata BGLB002028 I
BGLB007764 Biomphalaria glabrata BGLB007764 I
ENSP00000263334-D1 Bos grunniens ENSP00000263334-D1 I
ENSP00000350844-D1 Bos grunniens ENSP00000350844-D1 I
PAX5 Bos taurus ENSBTAG00000012498 I
PAX8 Bos taurus ENSBTAG00000019354 I
Bm14693 Brugia malayi Bm14693 I
Bm1956 Brugia malayi Bm1956 I
BTMF_0000869901 Brugia timori BTMF_0000869901 N
Brh_R001926 Buceros rhinoceros Brh_R001926 I
CBG04481 Caenorhabditis briggsae CBG04481 I
pax-2 Caenorhabditis elegans WBGene00003938 D
PAX5 Callithrix jacchus ENSCJAG00000010379 I
PAX8 Callithrix jacchus ENSCJAG00000013889 I
Aan_R002178 Calypte anna Aan_R002178 I
PAX5 Canis familiaris ENSCAFG00000002357 I
PAX8 Canis familiaris ENSCAFG00000007309 I
CapteG119889 Capitella teleta CapteG119889 I
CapteG166874 Capitella teleta CapteG166874 I
PAX5 Cavia porcellus ENSCPOG00000009987 I
PAX8 Cavia porcellus ENSCPOG00000012011 I
ENSCSAG00000010751 Chlorocebus sabaeus ENSCSAG00000010751 I
ENSCSAG00000016682 Chlorocebus sabaeus ENSCSAG00000016682 I
PAX5 Choloepus hoffmanni ENSCHOG00000003521 I
CLEC006621 Cimex lectularius CLEC006621 I
csin100153 Clonorchis sinensis csin100153 I
CGI_10012686 Crassostrea gigas CGI_10012686 I
pax8 Danio rerio ENSDARG00000015879 I
pax2a Danio rerio ENSDARG00000028148 I
pax2b Danio rerio ENSDARG00000032578 D
pax5 Danio rerio ENSDARG00000037383 I
DAPPUDRAFT_311028 Daphnia pulex DAPPUDRAFT_311028 I
YQE_05418 Dendroctonus ponderosae YQE_05418 N
YQE_12361 Dendroctonus ponderosae YQE_12361 I
DICVIV_04707 Dictyocaulus viviparus DICVIV_04707 I
Pax7 Dipodomys ordii ENSDORG00000011854 I
Pax5 Dipodomys ordii ENSDORG00000015818 I
nDi.2.2.2.g01404 Dirofilaria immitis nDi.2.2.2.g01404 I
nDi.2.2.2.g03678 Dirofilaria immitis nDi.2.2.2.g03678 I
DME_0000186001 Dracunculus medinensis DME_0000186001 N
GF13369 Drosophila ananassae FBgn0090401 I
GF20618 Drosophila ananassae FBgn0097624 I
GG16406 Drosophila erecta FBgn0108638 I
GH20564 Drosophila grimshawi FBgn0128027 I
GH23966 Drosophila grimshawi FBgn0131423 I
sv Drosophila melanogaster FBgn0005561 D
GI14046 Drosophila mojavensis FBgn0136800 I
GL18401 Drosophila persimilis FBgn0156002 I
spa-sv Drosophila pseudoobscura FBgn0249275 I
GM13025 Drosophila sechellia FBgn0167956 I
GD24421 Drosophila simulans FBgn0195757 I
GJ13730 Drosophila virilis FBgn0200951 I
GK13586 Drosophila willistoni FBgn0215594 I
GE14566 Drosophila yakuba FBgn0232164 I
PAX5 Echinops telfairi ENSETEG00000002360 I
EEL_0000889701 Elaeophora elaphi EEL_0000889701 N
EEL_0001009001 Elaeophora elaphi EEL_0001009001 I
EVEC_0000795701 Enterobius vermicularis EVEC_0000795701 I
EVEC_0001357701 Enterobius vermicularis EVEC_0001357701 I
PAX5 Equus caballus ENSECAG00000000551 I
PAX8 Erinaceus europaeus ENSEEUG00000003041 I
PAX5 Erinaceus europaeus ENSEEUG00000012531 I
PAX5 Felis catus ENSFCAG00000001628 I
PAX8 Felis catus ENSFCAG00000009580 I
ENSFALG00000012983 Ficedula albicollis ENSFALG00000012983 I
ENSGMOG00000000463 Gadus morhua ENSGMOG00000000463 I
ENSGMOG00000003366 Gadus morhua ENSGMOG00000003366 I
ENSGMOG00000006294 Gadus morhua ENSGMOG00000006294 N
Pax-2 Gallus gallus ENSGALG00000005689 I
Pax5B Gallus gallus ENSGALG00000016431 D
pax6b Gasterosteus aculeatus ENSGACG00000016030 I
pax2b Gasterosteus aculeatus ENSGACG00000002432 I
pax2a Gasterosteus aculeatus ENSGACG00000008391 I
pax5 Gasterosteus aculeatus ENSGACG00000016112 I
pax8 Gasterosteus aculeatus ENSGACG00000016747 I
Gfo_R013093 Geospiza fortis Gfo_R013093 I
GPLIN_000205200 Globodera pallida GPLIN_000205200 I
GPUH_0000812501 Gongylonema pulchrum GPUH_0000812501 I
PAX5 Gorilla gorilla ENSGGOG00000003633 I
PAX8 Gorilla gorilla ENSGGOG00000004587 I
HCOI01205400 Haemonchus contortus HCOI01205400 I
HPLM_0000491501 Haemonchus placei HPLM_0000491501 I
HPBE_0000479901 Heligmosomoides bakeri HPBE_0000479901 I
HelroG124549 Helobdella robusta HelroG124549 I
PAX6 Homo sapiens ENSG00000007372 D
PAX7 Homo sapiens ENSG00000009709 D
PAX2 Homo sapiens ENSG00000075891 D
PAX8 Homo sapiens ENSG00000125618 D
PAX5 Homo sapiens ENSG00000196092 D
ENSSTOG00000024354 Ictidomys tridecemlineatus ENSSTOG00000024354 I
ENSSTOG00000024664 Ictidomys tridecemlineatus ENSSTOG00000024664 I
ISCW000175 Ixodes scapularis ISCW000175 I
ENSLACG00000003762 Latimeria chalumnae ENSLACG00000003762 I
ENSLACG00000013159 Latimeria chalumnae ENSLACG00000013159 I
ENSLOCG00000012825 Lepisosteus oculatus ENSLOCG00000012825 I
ENSLOCG00000015261 Lepisosteus oculatus ENSLOCG00000015261 I
LDEC012767 Leptinotarsa decemlineata LDEC012767 I
nLs.2.1.2.g01338 Litomosoides sigmodontis nLs.2.1.2.g01338 N
nLs.2.1.2.g05197 Litomosoides sigmodontis nLs.2.1.2.g05197 I
LOAG_00159 Loa loa LOAG_00159 I
LotgiG135549 Lottia gigantea LotgiG135549 I
LotgiG161614 Lottia gigantea LotgiG161614 I
LotgiG99097 Lottia gigantea LotgiG99097 I
PAX8 Loxodonta africana ENSLAFG00000021590 I
PAX5 Loxodonta africana ENSLAFG00000028851 I
LCUP005878 Lucilia cuprina LCUP005878 I
LLOJ000106 Lutzomyia longipalpis LLOJ000106 I
LLOJ002076 Lutzomyia longipalpis LLOJ002076 I
ENSP00000350844 Macaca fascicularis ENSP00000350844 I
ENSP00000395498 Macaca fascicularis ENSP00000395498 I
PAX8 Macaca mulatta ENSMMUG00000011578 I
ENSMEUG00000013983 Macropus eugenii ENSMEUG00000013983 I
MESCA003563 Megaselia scalaris MESCA003563 I
MCINX012239 Melitaea cinxia MCINX012239 I
PAX8 Microcebus murinus ENSMICG00000003265 I
PAX5 Microcebus murinus ENSMICG00000017679 I
PAX5 Monodelphis domestica ENSMODG00000002720 I
PAX8 Monodelphis domestica ENSMODG00000013770 I
ENSMODG00000025571 Monodelphis domestica ENSMODG00000025571 I
MDOA010966 Musca domestica MDOA010966 I
ENSMPUG00000006012 Mustela putorius furo ENSMPUG00000006012 I
ENSMPUG00000009512 Mustela putorius furo ENSMPUG00000009512 I
Pax5 Mus musculus ENSMUSG00000014030 D
Pax8 Mus musculus ENSMUSG00000026976 I
Myotis_brandtii_PAX5_10017827 Myotis brandtii Myotis_brandtii_PAX5_10017827 I
Myotis_brandtii_Pax8_10002304 Myotis brandtii Myotis_brandtii_Pax8_10002304 I
PAX8 Myotis lucifugus ENSMLUG00000011936 I
PAX5 Myotis lucifugus ENSMLUG00000012652 I
NECAME_04629 Necator americanus NECAME_04629 I
NEMVEDRAFT_v1g243681 Nematostella vectensis NEMVEDRAFT_v1g243681 I
ENSNLEG00000002157 Nomascus leucogenys ENSNLEG00000002157 I
ENSNLEG00000003664 Nomascus leucogenys ENSNLEG00000003664 I
PAX5 Ochotona princeps ENSOPRG00000000734 I
PAX8 Ochotona princeps ENSOPRG00000012910 I
Ocbimv22007901m.g Octopus bimaculoides Ocbimv22007901m.g I
Ocbimv22011111m.g Octopus bimaculoides Ocbimv22011111m.g I
OESDEN_18680 Oesophagostomum dentatum OESDEN_18680 I
OFLC_0001383501 Onchocerca flexuosa OFLC_0001383501 I
nOo.2.0.1.g04580 Onchocerca ochengi nOo.2.0.1.g04580 I
WBGene00241130 Onchocerca volvulus WBGene00241130 I
Ogr05570 Ophisaurus gracilis Ogr05570 I
Ogr18043 Ophisaurus gracilis Ogr18043 I
ENSONIG00000000205 Oreochromis niloticus ENSONIG00000000205 I
ENSONIG00000008952 Oreochromis niloticus ENSONIG00000008952 I
ENSONIG00000016065 Oreochromis niloticus ENSONIG00000016065 I
ENSONIG00000018496 Oreochromis niloticus ENSONIG00000018496 I
PAX5 Ornithorhynchus anatinus ENSOANG00000007579 I
PAX8 Ornithorhynchus anatinus ENSOANG00000010554 I
PAX8 Oryctolagus cuniculus ENSOCUG00000004187 I
PAX5 Oryctolagus cuniculus ENSOCUG00000012281 I
pax5 Oryzias latipes ENSORLG00000005326 I
pax8 Oryzias latipes ENSORLG00000007225 I
pax2b Oryzias latipes ENSORLG00000009321 I
ENSORLG00000019389 Oryzias latipes ENSORLG00000019389 I
ENSOGAG00000004773 Otolemur garnettii ENSOGAG00000004773 I
PAX8 Otolemur garnettii ENSOGAG00000009418 I
ENSOARG00000011518 Ovis aries ENSOARG00000011518 I
ENSOARG00000020812 Ovis aries ENSOARG00000020812 I
PAX8 Pan troglodytes ENSPTRG00000012380 I
PAX5 Pan troglodytes ENSPTRG00000020936 I
ENSPANG00000016994 Papio anubis ENSPANG00000016994 I
ENSPANG00000025475 Papio anubis ENSPANG00000025475 I
PEQ_0001166701 Parascaris equorum PEQ_0001166701 I
PTRK_0001603600 Parastrongyloides trichosuri PTRK_0001603600 I
ENSPMAG00000010414 Petromyzon marinus ENSPMAG00000010414 I
ENSPFOG00000003702 Poecilia formosa ENSPFOG00000003702 I
ENSPFOG00000011719 Poecilia formosa ENSPFOG00000011719 I
ENSPFOG00000013202 Poecilia formosa ENSPFOG00000013202 I
ENSPFOG00000019830 Poecilia formosa ENSPFOG00000019830 I
Pvit_15554 Pogona vitticeps Pvit_15554 I
ENSPPYG00000012184 Pongo abelii ENSPPYG00000012184 I
ENSPPYG00000019064 Pongo abelii ENSPPYG00000019064 I
PAX5 Procavia capensis ENSPCAG00000004660 I
PAX7 Procavia capensis ENSPCAG00000005303 I
PAX8 Procavia capensis ENSPCAG00000005498 I
PAX5 Pteropus vampyrus ENSPVAG00000000054 I
PAX8 Pteropus vampyrus ENSPVAG00000005666 I
Pax2 Rattus norvegicus ENSRNOG00000014253 I
Pax5 Rattus norvegicus ENSRNOG00000024729 I
Pax8 Rattus norvegicus ENSRNOG00000026203 D
RSKR_0000585500 Rhabditophanes kr3021 RSKR_0000585500 I
RPRC001910 Rhodnius prolixus RPRC001910 I
RPRC011448 Rhodnius prolixus RPRC011448 N
nRc.2.0.1.g01878 Romanomermis culicivorax nRc.2.0.1.g01878 I
Sakowv30025789m.g Saccoglossus kowalevskii Sakowv30025789m.g I
ENSSHAG00000011845 Sarcophilus harrisii ENSSHAG00000011845 I
SBAD_0001213701 Soboliphyme baturini SBAD_0001213701 I
SINV11533 Solenopsis invicta SINV11533 I
L596_g12356 Steinernema carpocapsae L596_g12356 I
L596_g7168 Steinernema carpocapsae L596_g7168 I
L889_g28670 Steinernema feltiae L889_g28670 I
L889_g29910 Steinernema feltiae L889_g29910 I
L893_g1041 Steinernema glaseri L893_g1041 I
L893_g8856 Steinernema glaseri L893_g8856 I
L898_g18055 Steinernema monticolum L898_g18055 I
L892_g26455 Steinernema scapterisci L892_g26455 I
SMAR001091 Strigamia maritima SMAR001091 I
SMAR015380 Strigamia maritima SMAR015380 I
SPU_006786 Strongylocentrotus purpuratus SPU_006786 I
SPU_014539 Strongylocentrotus purpuratus SPU_014539 I
SPU_027334 Strongylocentrotus purpuratus SPU_027334 I
SPAL_0000372000 Strongyloides papillosus SPAL_0000372000 I
SSTP_0000522800 Strongyloides stercoralis SSTP_0000522800 I
SVE_0227200 Strongyloides venezuelensis SVE_0227200 I
SVUK_0001011501 Strongylus vulgaris SVUK_0001011501 I
ENSSSCG00000005345 Sus scrofa ENSSSCG00000005345 I
ENSSSCG00000021332 Sus scrofa ENSSSCG00000021332 I
SMUV_0000412301 Syphacia muris SMUV_0000412301 I
PAX5 Taeniopygia guttata ENSTGUG00000007215 I
pax5 Takifugu rubripes ENSTRUG00000003227 I
pax2a Takifugu rubripes ENSTRUG00000008891 I
pax2b Takifugu rubripes ENSTRUG00000011987 I
ENSTSYG00000001117 Tarsius syrichta ENSTSYG00000001117 I
ENSTSYG00000008085 Tarsius syrichta ENSTSYG00000008085 I
TELCIR_10899 Teladorsagia circumcincta TELCIR_10899 I
tetur29g01000 Tetranychus urticae tetur29g01000 I
pax5 Tetraodon nigroviridis ENSTNIG00000005085 I
ENSTNIG00000005391 Tetraodon nigroviridis ENSTNIG00000005391 I
pax2a Tetraodon nigroviridis ENSTNIG00000008644 I
pax8 Tetraodon nigroviridis ENSTNIG00000009029 I
TCLT_0000192601 Thelazia callipaeda TCLT_0000192601 N
TCLT_0000790801 Thelazia callipaeda TCLT_0000790801 I
TCNE_0000738401 Toxocara canis TCNE_0000738401 I
TCNE_0001785701 Toxocara canis TCNE_0001785701 I
TC003570 Tribolium castaneum TC003570 I
TC008672 Tribolium castaneum TC008672 I
EFV60539 Trichinella spiralis EFV60539 I
PAX5 Tupaia belangeri ENSTBEG00000007983 I
PAX8 Tupaia belangeri ENSTBEG00000008679 I
PAX5 Tursiops truncatus ENSTTRG00000006049 I
PAX8 Tursiops truncatus ENSTTRG00000011948 I
PAX8 Vicugna pacos ENSVPAG00000003973 I
pax2.L Xenopus laevis XB-GENE-486805 I
pax8.L Xenopus laevis XB-GENE-865008 I
pax5.L Xenopus laevis XB-GENE-865318 I
pax8 Xenopus tropicalis XB-GENE-483693 I
pax2 Xenopus tropicalis XB-GENE-486801 D
XP_002935920 Xenopus tropicalis XP_002935920 I
ENSXMAG00000012680 Xiphophorus maculatus ENSXMAG00000012680 I
L798_15745 Zootermopsis nevadensis L798_15745 I