CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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evm.TU.supercontig_55.163
(
Carica papaya
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02362 (B3)
IPR003340
evm.TU.supercontig_55.163
T023141_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
evm.model.supercontig_55.163
B3
127
218
FAKSMVRSHVASCFWMGLPGLFCKLHLPNKDTTITLEDESGNEYKTKYIADKTGLSAGWRQFVSGHNLLEGDVLVFQLVKPTKFKVYIIRAN
Links
Other
B3
family TFs
Other
Carica papaya
TFs
21 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PK03938.1
Cannabis sativa
PK03938.1
N
0.804
Ciclev10025376m.g
Citrus clementina
Ciclev10025376m.g
N
0.761
orange1.1g010160m.g
Citrus sinensis
orange1.1g010160m.g
N
0.761
Eucgr.H02009
Eucalyptus grandis
Eucgr.H02009
N
0.783
Eucgr.H01651
Eucalyptus grandis
Eucgr.H01651
N
0.783
gene24052-v1.0-hybrid
Fragaria vesca
gene24052-v1.0-hybrid
N
0.750
GLYMA17G20175
Glycine max
GLYMA17G20175
N
0.804
Gorai.007G212100
Gossypium raimondii
Gorai.007G212100
N
0.848
LjSGA_111419.1
Lotus japonicus
LjSGA_111419.1
N
0.772
MDP0000236656
Malus domestica
MDP0000236656
N
0.728
MDP0000258417
Malus domestica
MDP0000258417
N
0.804
MDP0000314333
Malus domestica
MDP0000314333
N
0.793
cassava2445.valid.m1
Manihot esculenta
cassava2445.valid.m1
N
0.750
POPTR_0007s11170
Populus trichocarpa
POPTR_0007s11170
N
0.707
POPTR_0005s18090
Populus trichocarpa
POPTR_0005s18090
N
0.707
30115.m001183
Ricinus communis
30115.m001183
N
0.717
SapurV1A.0711s0090
Salix purpurea
SapurV1A.0711s0090
N
0.707
SapurV1A.0815s0020
Salix purpurea
SapurV1A.0815s0020
N
0.717
PGSC0003DMG400015771
Solanum tuberosum
PGSC0003DMG400015771
N
0.707
TCM_000597
Theobroma cacao
TCM_000597
N
0.804
VIT_07s0031g00780
Vitis vinifera
VIT_07s0031g00780
N
0.750