CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.J03563
(
Panicum virgatum
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02362 (B3)
IPR003340
Pavir.J03563
T023932_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.J03563.1.p
B3
536
637
LQKVLKQSDVGSLGRIVLPKKEAEVHLPELKTRDGISIPMEDIGTSRVWNMRYRFWPNNKSRMYLLENTGEFVRSNELQEGDFIVIYSDVKSGKYLIRGVKV
Links
Other
B3
family TFs
Other
Panicum virgatum
TFs
64 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
augustus_masked-nMf.1.1.scaf16865-processed-gene-0.0
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf16865-processed-gene-0.0
N
maker-nMf.1.1.scaf24083-snap-gene-0.4
Meloidogyne floridensis
maker-nMf.1.1.scaf24083-snap-gene-0.4
N
Minc05262
Meloidogyne incognita
Minc05262
N
Minc05263
Meloidogyne incognita
Minc05263
N
Minc07105
Meloidogyne incognita
Minc07105
N