Thhalv10021075m.g (Eutrema salsugineum)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 Thhalv10021075m.g T024261_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
VRN1
M06704_2.00 		Arabidopsis thaliana
WWWTTTTTTTTTTTTTTTTTTTTTTTKTN
NAMAAAAAAAAAAAAAAAAAAAAAAAWWW		 Dap-seq
OMalley et al.(2016)
VRN1_col_a 		0.995 0.995
VRN1
M06705_2.00 		Arabidopsis thaliana
NWBNTTTTTTTTTTTTKKB
VMMAAAAAAAAAAAANVWN		 Dap-seq
OMalley et al.(2016)
VRN1_colamp_a 		0.995 0.995
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10021075m B3 5 98
Thhalv10021075m B3 244 338

Links

Other B3 family TFs
Other Eutrema salsugineum TFs

30 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CaO19.12262 Candida albicans CaO19.12262 N
CaO19.4799 Candida albicans CaO19.4799 N
CLUG_01728 Candida lusitaniae CLUG_01728 N
G210_5637 Candida maltosa G210_5637 N
CTRG_03423 Candida tropicalis CTRG_03423 N
CLUG_01728 Clavispora lusitaniae CLUG_01728 N