CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CRE01079
(
Caenorhabditis remanei
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02892 (zf-BED)
IPR003656
CRE01079
T025822_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CRE01079
BED ZF
197
241
HPVWDFFKDMKDSTGAGGVICLHCSWSGDDRSPNNLRTHLKKFHS
Links
Other
BED ZF
family TFs
Other
Caenorhabditis remanei
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ANCDUO_16959
Ancylostoma duodenale
ANCDUO_16959
N
0.714
ASIM_0001581701
Anisakis simplex
ASIM_0001581701
N
0.767
CJA37634
Caenorhabditis japonica
CJA37634
N
0.907
DICVIV_10567
Dictyocaulus viviparus
DICVIV_10567
N
0.744
HCOI01730700
Haemonchus contortus
HCOI01730700
N
0.884
Hba_20498
Heterorhabditis bacteriophora
Hba_20498
N
0.860
NECAME_15936
Necator americanus
NECAME_15936
N
0.824
scaffold547-EXSNAP2012.7
Pristionchus exspectatus
scaffold547-EXSNAP2012.7
N
0.721
Ppa-bed-2
Pristionchus pacificus
PPA00848
N
0.721
L596_g23663
Steinernema carpocapsae
L596_g23663
N
0.767
L889_g25671
Steinernema feltiae
L889_g25671
N
0.744
L898_g27342
Steinernema monticolum
L898_g27342
N
0.767
L892_g30484
Steinernema scapterisci
L892_g30484
N
0.767
TCNE_0000235701
Toxocara canis
TCNE_0000235701
N
0.786