Gm38394 (Mus musculus)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02892 (zf-BED) IPR003656 ENSMUSG00000094410 T026098_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Zbed6
M09777_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ZBED6_01 		1.000 1.000
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSMUSP00000136026 BED ZF 133 181
ENSMUSP00000136026 BED ZF 268 316
ENSMUSP00000139417 BED ZF 133 181
ENSMUSP00000139417 BED ZF 268 316

Links

Other BED ZF family TFs
Other Mus musculus TFs

23 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
VRN1 Arabidopsis lyrata fgenesh2_kg.3__2116__AT3G18990.1 I
VRN1 Arabidopsis thaliana AT3G18990 D
Bostr.19424s0762 Boechera stricta Bostr.19424s0762 I
Bo1g115980 Brassica oleracea Bo1g115980 I
Bo3g071890 Brassica oleracea Bo3g071890 I
Bo5g116790 Brassica oleracea Bo5g116790 I
Bra037544 Brassica rapa Bra037544 I
PK10791.1 Cannabis sativa PK10791.1 I
Cagra.5105s0003 Capsella grandiflora Cagra.5105s0003 I
Carubv10015637m.g Capsella rubella Carubv10015637m.g I
Ciclev10028642m.g Citrus clementina Ciclev10028642m.g I
orange1.1g016655m.g Citrus sinensis orange1.1g016655m.g I
Thhalv10021075m.g Eutrema salsugineum Thhalv10021075m.g I
gene31955-v1.0-hybrid Fragaria vesca gene31955-v1.0-hybrid I
Gorai.013G040000 Gossypium raimondii Gorai.013G040000 I
Gorai.002G006500 Gossypium raimondii Gorai.002G006500 I
Gorai.005G240900 Gossypium raimondii Gorai.005G240900 I
Gorai.012G150900 Gossypium raimondii Gorai.012G150900 I
MDP0000555456 Malus domestica MDP0000555456 N
cassava29880.valid.m1 Manihot esculenta cassava29880.valid.m1 I
POPTR_0004s15400 Populus trichocarpa POPTR_0004s15400 I
POPTR_0009s11170 Populus trichocarpa POPTR_0009s11170 I
Pm021537 Prunus mume Pm021537 N
PRUPE_ppa006275mg Prunus persica PRUPE_ppa006275mg I
29851.m002498 Ricinus communis 29851.m002498 I
SapurV1A.0090s0340 Salix purpurea SapurV1A.0090s0340 I
SapurV1A.0979s0040 Salix purpurea SapurV1A.0979s0040 I
SapurV1A.2089s0010 Salix purpurea SapurV1A.2089s0010 I
TCM_006971 Theobroma cacao TCM_006971 I