ORUFI08G05400 (Oryza rufipogon)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02892 (zf-BED) IPR003656 ORUFI08G05400 T027167_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
ORUFI08G05400.1 BED ZF 247 297
ORUFI08G05400.1 BED ZF 333 377
ORUFI08G05400.2 BED ZF 247 297
ORUFI08G05400.2 BED ZF 346 390

Links

Other BED ZF family TFs
Other Oryza rufipogon TFs

25 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_043_00021 Aquilegia coerulea Aquca_043_00021 I
scaffold_401930.1 Arabidopsis lyrata scaffold_401930.1 I
ASR3 Arabidopsis thaliana AT2G33550 D
Bostr.23794s0746 Boechera stricta Bostr.23794s0746 I
Bo4g043600 Brassica oleracea Bo4g043600 I
Bo4g182020 Brassica oleracea Bo4g182020 I
Bra005486 Brassica rapa Bra005486 I
Bra021860 Brassica rapa Bra021860 I
PK25885.1 Cannabis sativa PK25885.1 I
Carubv10023675m.g Capsella rubella Carubv10023675m.g I
evm.TU.supercontig_2461.1 Carica papaya evm.TU.supercontig_2461.1 I
Cla001502 Citrullus lanatus Cla001502 I
Ciclev10005329m.g Citrus clementina Ciclev10005329m.g I
orange1.1g019057m.g Citrus sinensis orange1.1g019057m.g I
Cucsa.349220 Cucumis sativus Cucsa.349220 I
Eucgr.B03553 Eucalyptus grandis Eucgr.B03553 I
Thhalv10016974m.g Eutrema salsugineum Thhalv10016974m.g I
GLYMA08G28880 Glycine max GLYMA08G28880 I
GLYMA18G51790 Glycine max GLYMA18G51790 I
Gorai.002G021600 Gossypium raimondii Gorai.002G021600 I
chr1.LjT14I13.140.nd Lotus japonicus chr1.LjT14I13.140.nd I
MDP0000232058 Malus domestica MDP0000232058 I
cassava12909.valid.m1 Manihot esculenta cassava12909.valid.m1 I
cassava13649.valid.m1 Manihot esculenta cassava13649.valid.m1 I
mgf009760m Mimulus guttatus mgf009760m I
POPTR_0001s13060 Populus trichocarpa POPTR_0001s13060 I
POPTR_0003s16150 Populus trichocarpa POPTR_0003s16150 I
30128.m008552 Ricinus communis 30128.m008552 I
SapurV1A.0499s0110 Salix purpurea SapurV1A.0499s0110 I
SapurV1A.2674s0010 Salix purpurea SapurV1A.2674s0010 I
Solyc04g045430.2 Solanum lycopersicum Solyc04g045430.2 I
VIT_01s0150g00050 Vitis vinifera VIT_01s0150g00050 I