Ppa-bed-2 (Pristionchus pacificus)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02892 (zf-BED) IPR003656 PPA00848 T027422_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
PPA00848 BED ZF 114 158

Links

Other BED ZF family TFs
Other Pristionchus pacificus TFs

5 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AGL87 Arabidopsis thaliana AT1G22590 N
Bostr.12659s0111 Boechera stricta Bostr.12659s0111 N
Bo5g038690 Brassica oleracea Bo5g038690 N
Bo7g057820 Brassica oleracea Bo7g057820 N
Bra012335 Brassica rapa Bra012335 N
Bra024521 Brassica rapa Bra024521 N
Cagra.0114s0045 Capsella grandiflora Cagra.0114s0045 N
Carubv10006189m.g Capsella rubella Carubv10006189m.g N
Carubv10011303m.g Capsella rubella Carubv10011303m.g N
Carubv10021360m.g Capsella rubella Carubv10021360m.g N
Carubv10021540m.g Capsella rubella Carubv10021540m.g N
Carubv10021762m.g Capsella rubella Carubv10021762m.g N
Carubv10022252m.g Capsella rubella Carubv10022252m.g N
Thhalv10008961m.g Eutrema salsugineum Thhalv10008961m.g N