VIT_12s0142g00390 (Vitis vinifera)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02892 (zf-BED) IPR003656 VIT_12s0142g00390 T027888_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
VIT_12s0142g00390.t01 BED ZF 138 189

Links

Other BED ZF family TFs
Other Vitis vinifera TFs

29 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_102_00001 Aquilegia coerulea Aquca_102_00001 N 0.727
Aquca_039_00001 Aquilegia coerulea Aquca_039_00001 N 0.814
Bostr.28625s0227 Boechera stricta Bostr.28625s0227 N 0.727
Bostr.10273s0360 Boechera stricta Bostr.10273s0360 N 0.857
Bo6g110620 Brassica oleracea Bo6g110620 N 0.762
Bo1g129970 Brassica oleracea Bo1g129970 N 0.727
PK13949.1 Cannabis sativa PK13949.1 N 0.907
Cagra.10840s0006 Capsella grandiflora Cagra.10840s0006 N 0.857
Cagra.0007s0024 Capsella grandiflora Cagra.0007s0024 N 0.727
Carubv10022346m.g Capsella rubella Carubv10022346m.g N 0.857
Carubv10013145m.g Capsella rubella Carubv10013145m.g N 0.727
Cucsa.185330 Cucumis sativus Cucsa.185330 N 0.909
Eucgr.K01194 Eucalyptus grandis Eucgr.K01194 N 0.977
Thhalv10020233m.g Eutrema salsugineum Thhalv10020233m.g N 0.727
Thhalv10018229m.g Eutrema salsugineum Thhalv10018229m.g N 0.773
gene24495-v1.0-hybrid Fragaria vesca gene24495-v1.0-hybrid N 0.833
GLYMA18G12556 Glycine max GLYMA18G12556 N 0.909
GLYMA08G42321 Glycine max GLYMA08G42321 N 0.909
Gorai.012G042700 Gossypium raimondii Gorai.012G042700 N 0.953
cassava7665.valid.m1 Manihot esculenta cassava7665.valid.m1 N 0.727
cassava7664.valid.m1 Manihot esculenta cassava7664.valid.m1 N 0.727
cassava35563.valid.m1 Manihot esculenta cassava35563.valid.m1 N 0.955
cassava21091.m1 Manihot esculenta cassava21091.m1 N 0.930
mgf000829m Mimulus guttatus mgf000829m N 0.886
Pm014562 Prunus mume Pm014562 N 0.833
PRUPE_ppa002590mg Prunus persica PRUPE_ppa002590mg N 0.833
Solyc10g007810.2 Solanum lycopersicum Solyc10g007810.2 N 0.955
PGSC0003DMG400021240 Solanum tuberosum PGSC0003DMG400021240 N 0.955
TCM_001836 Theobroma cacao TCM_001836 N 0.953